CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.11770.1.A1_at

Gene name hypothetical protein LOC100191551

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 99.0 Zm.11770.1.A1_at BM380607 hypothetical protein LOC100191551 - 9e-5 At5g12010 unknown protein S.X. H.G.
0.44 55.7 Zm.18005.1.A1_at BM347410 hypothetical protein LOC100275925 - 2e+0 At1g69760 unknown protein S.X. H.G.
0.32 33.4 Zm.18364.1.S1_at CO526339 hypothetical protein LOC100279528 - 6e-2 At1g66890 - S.X. H.G.
0.18 11.6 Zm.15550.1.S1_a_at AI491343 hypothetical protein LOC100191653 /// protein phosphatase 2C - 5e-9 At5g66080 protein phosphatase 2C family protein / PP2C family protein S.X. H.G.
0.11 5.3 Zm.10069.1.A1_at AY108373.1 - - 4e+0 At5g03460 unknown protein S.X. H.G.
0.10 4.6 Zm.5274.1.S1_at CD990782 triose phosphate/phosphate translocator, non-green plastid,chloroplast - 4e-18 At5g33320 CUE1 (CAB UNDEREXPRESSED 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
22.6 99.5 GSM206332 Lower pulvinus 15 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
21.2 99.4 GSM206314 Upper pulvinus 15 min total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
14.3 98.9 GSM375795 Deep-sowing 10d treatment Control, biological rep2 GSE15048 Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
13.3 98.8 GSM206326 Upper pulvinus 15 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
12.8 98.7 GSM320447 protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.6 98.4 GSM206302 Upper pulvinus 15 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
9.1 98.2 GSM375797 Deep-sowing 10d treatment UCZ, biological rep2 GSE15048 Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
8.6 98.1 GSM206290 Upper pulvinus 15 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
8.2 98.0 GSM320451 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.7 97.9 GSM385708 Deep-sowing 10d treatment IAA, biological rep2 GSE15371 Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.16 2e-22 105 Zm.2671.1.S1_at AW066803 - - 3e+0 At1g26150 PERK10 (PROLINE-RICH EXTENSIN-LIKE RECEPTOR KINASE 10) C.G. S.X.
0.02 6e-4 44 Zm.5581.1.S1_at AF143447.1 rough sheath2 - 1e-15 At2g37630 AS1 (ASYMMETRIC LEAVES 1) C.G. S.X.
0.01 9e-3 40 Zm.15605.1.S1_at CA402349 isopenicillin N epimerase - 2e-2 At3g62130 epimerase-related C.G. S.X.
0.02 4e-2 38 Zm.8905.1.A1_at BM075564 - - 1e-1 At5g16030 unknown protein C.G. S.X.
0.02 4e-2 38 Zm.7874.1.A1_at CO530561 hypothetical protein LOC100216770 - 6e-1 At4g24026 unknown protein C.G. S.X.
0.02 4e-2 38 Zm.14226.1.A1_at BM337251 hypothetical protein LOC100273457 - 3e-2 At3g20100 CYP705A19 C.G. S.X.
0.02 1e-1 36 Zm.15614.1.S1_at CD436993 - - 2e-1 At3g19890 F-box family protein C.G. S.X.
0.02 1e-1 36 Zm.13666.1.A1_at AW055570 hypothetical protein LOC100273665 - 2e-4 At2g27480 calcium ion binding C.G. S.X.
0.01 6e-1 34 Zm.463.1.A1_at U95953.1 viviparous14 - 5e-6 At3g14440 NCED3 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 3) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 9e-5 48 Arabidopsis thaliana At5g12010 831074 unknown protein F:unknown;P:response to salt stress;C:chloroplast, plasma membrane, membrane;MPFO - - - C.G. S.X.
0.07 8e-6 52 Glycine max GmaAffx.15586.1.S1_at BG839271 - - 7e-6 At5g12010 unknown protein C.G. S.X.
0.30 7e-84 309 Hordeum vulgare Contig4976_at Contig4976 - - 4e+0 At5g12010 unknown protein C.G. S.X.
0.31 1e-128 460 Oryza sativa Os01g0582600 9629.m03821 - Conserved hypothetical protein 7e-5 At4g29780 unknown protein C.G. S.X.
0.12 3e-2 40 Populus trichocarpa PtpAffx.29056.1.S1_at DN500805 hypothetical protein - 6e-6 At5g12010 unknown protein C.G. S.X.
0.30 1e-90 333 Triticum aestivum Ta.10520.1.S1_at AL828817 - - 2e-2 At4g29780 unknown protein C.G. S.X.
0.03 3e-2 38 Vitis vinifera 1612919_at CB971032 - - 4e+0 At2g33510 protein binding C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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