CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.1158.1.A1_at

Gene name

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 99.0 Zm.1158.1.A1_at AY107067.1 - - 4e-31 At5g10270 CDKC S.X. H.G.
0.50 65.7 Zm.7620.1.A1_at CF629426 hypothetical protein LOC100279978 - 2e-3 At2g24010 scpl23 (serine carboxypeptidase-like 23) S.X. H.G.
0.44 55.7 Zm.9201.1.A1_at BM340120 hypothetical protein LOC100272902 - 6e+0 At5g62540 UBC3 (ubiquitin-conjugating enzyme 3) S.X. H.G.
0.44 55.7 Zm.10479.1.S1_at BQ486450 - - 5e+0 At5g13990 ATEXO70C2 (exocyst subunit EXO70 family protein C2) S.X. H.G.
0.33 36.0 Zm.6293.1.A1_at CF038760 hypothetical protein LOC100216905 - 4e+0 At5g08400 unknown protein S.X. H.G.
0.23 18.6 Zm.218.1.A1_a_at AB016802.1 ABA stimulation MAP kinase - 6e-42 At2g43790 ATMPK6 (ARABIDOPSIS THALIANA MAP KINASE 6) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.0 96.7 GSM206307 Lower pulvinus 5 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.3 96.1 GSM206310 Lower pulvinus 60 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.3 96.1 GSM206309 Lower pulvinus 30 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.9 95.7 GSM206305 Right pulvinus control polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.6 95.2 GSM206331 Lower pulvinus 5 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.6 95.2 GSM206303 Upper pulvinus 30 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.5 95.1 GSM206300 Upper pulvinus 2 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.5 95.1 GSM206308 Lower pulvinus 15 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.5 95.1 GSM206288 Upper pulvinus 2 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.3 94.7 GSM206304 Upper pulvinus 60 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.78 0 2082 Zm.14413.1.A1_at CF052725 hypothetical protein LOC100279243 - 1e-21 At5g10270 CDKC C.G. S.X.
0.02 2e-3 44 Zm.2347.1.S1_at AW424529 - - 3e-11 At1g72300 leucine-rich repeat transmembrane protein kinase, putative C.G. S.X.
0.04 2e-3 44 Zm.14319.2.A1_x_at CF629190 cell division control protein 2 - 8e-16 At3g48750 CDC2 (CELL DIVISION CONTROL 2) C.G. S.X.
0.03 2e-3 44 Zm.14319.1.A1_a_at M60526.1 cell division control protein 2 /// protein cdc2 kinase - 3e-12 At3g48750 CDC2 (CELL DIVISION CONTROL 2) C.G. S.X.
0.03 2e-3 44 Zm.14319.1.A1_at M60526.1 protein cdc2 kinase - 3e-12 At3g48750 CDC2 (CELL DIVISION CONTROL 2) C.G. S.X.
0.02 2e-3 44 Zm.12226.1.A1_at AY104247.1 hypothetical protein LOC100273306 - 8e-7 At3g48750 CDC2 (CELL DIVISION CONTROL 2) C.G. S.X.
0.01 4e-1 36 Zm.14496.1.A1_at CF014750 sesquiterpene cyclase-like - 1e+0 At5g46710 zinc-binding family protein C.G. S.X.
0.01 4e-1 36 Zm.13613.1.A1_at CF623212 hypothetical protein LOC100275557 - 3e-6 At4g21490 NDB3 C.G. S.X.
0.01 2e+0 34 Zm.9503.1.A1_at BM269403 hypothetical protein LOC100191795 - 2e-3 At1g63700 YDA (YODA) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.34 4e-31 137 Arabidopsis thaliana At5g10270 830891 CDKC Encodes CDKC;1, part of a CDKC kinase complex that is targeted by Cauliflower mosaic virus (CaMV) for transcriptional activation of viral genes. Also regulates plant growth and development. - - - C.G. S.X.
0.02 3e-1 38 Glycine max Gma.13580.3.S1_at BI973761 - - 5e-5 At5g19430 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.60 0 1013 Hordeum vulgare Contig14838_at Contig14838 - - 1e-5 At5g10270 CDKC C.G. S.X.
0.69 0 1320 Oryza sativa Os01g0958000 AK103469.1 - Cell division control protein 2 homolog 2 (EC2.7.1.37) (Fragment) 1e-21 At5g64960 CDKC2 (Cyclin dependent kinase group C 2) C.G. S.X.
0.28 1e-37 159 Populus trichocarpa PtpAffx.206011.1.S1_s_at pmrna11915 hypothetical protein - 3e-114 At5g10270 CDKC C.G. S.X.
0.51 0 714 Triticum aestivum Ta.6960.1.S1_a_at CK205593 - - 1e-18 At5g64960 CDKC2 (Cyclin dependent kinase group C 2) C.G. S.X.
0.03 1e+0 34 Vitis vinifera 1616197_at BQ795033 similar to cdc2MsC - 1e+0 At3g05920 heavy-metal-associated domain-containing protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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