Gene omics information

Query gene ID Zm.11550.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5065.7Zm.11550.1.A1_atBG320003--1e-3At3g24590PLSP1 (plastidic type I signal peptidase 1)S.X.H.G.
0.8094.0Zm.15978.1.A1_atAI734470Hypothetical protein LOC100191203-1e+0At4g27310zinc finger (B-box type) family proteinS.X.H.G.
0.4658.4Zm.15800.1.S1_atCF636481hypothetical protein LOC100273134 /// 14-3-3-like protein-2e-60At5g16050GRF5 (GENERAL REGULATORY FACTOR 5)S.X.H.G.
0.3336.0Zm.8302.1.A1_atCO530440hypothetical protein LOC100191636-7e-1At5g61660glycine-rich proteinS.X.H.G.
0.1811.6Zm.15800.2.A1_atCD998623Hypothetical LOC542285-3e-21At1g78300GRF2 (GENERAL REGULATORY FACTOR 2)S.X.H.G.
0.094.0Zm.719.2.S1_a_atBG320289thioredoxin M1-4e-1At1g11684unknown proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
11.798.6GSM253247ZM_12h_SG200_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
11.298.5GSM323172Zm_SG200Dpep1_24hpi_IIIGSE12892Maize gene expression during infection with Ustilago maydis strain SG200Dpep1
10.298.4GSM253245ZM_12h_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
9.998.3GSM253244ZM_12h_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
9.598.3GSM253251ZM_24h_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
9.598.3GSM323170Zm_SG200Dpep1_24hpi_IGSE12892Maize gene expression during infection with Ustilago maydis strain SG200Dpep1
9.598.3GSM253250ZM_24h_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
8.598.1GSM253252ZM_24h_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
8.598.1GSM323171Zm_SG200Dpep1_24hpi_IIGSE12892Maize gene expression during infection with Ustilago maydis strain SG200Dpep1
8.298.0GSM253248ZM_12h_SG200_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.038e-340Zm.2361.1.A1_atBM381388hypothetical protein LOC100191552-3e-17At1g5354017.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)C.G.S.X.
0.021e-136Zm.9004.1.A1_atBM268576Hypothetical protein LOC100194029-6e-4At2g37660binding / catalytic/ coenzyme bindingC.G.S.X.
0.021e-136Zm.9004.1.S1_atBM074268hypothetical protein LOC100194029-6e-4At2g37660binding / catalytic/ coenzyme bindingC.G.S.X.
0.032e+032ZmAffx.1355.1.S1_at40794996-45--7e-138Atmg00640-C.G.S.X.
0.022e+032Zm.2592.1.S1_atBM351079hypothetical protein LOC100191248-1e-5At5g20720CPN20 (CHAPERONIN 20)C.G.S.X.
0.012e+032Zm.1942.1.A1_atCF014864--7e-57At5g49460ACLB-2 (ATP CITRATE LYASE SUBUNIT B 2)C.G.S.X.
0.038e+030ZmAffx.1509.1.S1_at11990232-51--2e-106Atcg00730-C.G.S.X.
0.028e+030Zm.4824.1.A1_x_atCD446403hypothetical protein LOC100273118-5e-23At3g0484040S ribosomal protein S3A (RPS3aA)C.G.S.X.
0.018e+030Zm.4944.1.S1_atAF272752.1kinesin-like protein4-1e-10At2g36200kinesin motor protein-relatedC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.101e-344Arabidopsis thalianaAt3g24590822055PLSP1 (plastidic type I signal peptidase 1)Encodes a signal peptidase Plsp1 (plastidic type I signal peptidase 1). Required for thylakoid development. Functions in the maturation of the 75-kD component of the translocon at the outer envelope membrane of chloroplasts and oxygen evolving complex subunit 33 (OE33).---C.G.S.X.
0.052e-344Glycine maxGma.1323.1.S1_atCD408818--2e-3At3g24590PLSP1 (plastidic type I signal peptidase 1)C.G.S.X.
0.232e-25115Hordeum vulgareContig18560_atContig18560--2e-9At3g24590PLSP1 (plastidic type I signal peptidase 1)C.G.S.X.
0.244e-39163Oryza sativaOsAffx.12074.1.S1_at---0C.G.S.X.
0.164e-446Populus trichocarpaPtp.941.1.S1_atCK089608--2e-8At3g24590PLSP1 (plastidic type I signal peptidase 1)C.G.S.X.
0.045e+032Triticum aestivumTa.611.2.S1_atBG909122--5e-2At3g09925pollen Ole e 1 allergen and extensin family proteinC.G.S.X.
0.152e-1271Vitis vinifera1616672_atCF516136hypothetical protein LOC100252527-2e-2At3g24590PLSP1 (plastidic type I signal peptidase 1)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage