Gene omics information

Query gene ID Zm.11387.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0Zm.11387.1.A1_atBM350291--4e-1At1g71930VND7 (VASCULAR RELATED NAC-DOMAIN PROTEIN 7)S.X.H.G.
0.6077.8Zm.209.1.A1_atAY112108.1cytokinin oxidase1-9e-1At3g63440CKX6 (CYTOKININ OXIDASE/DEHYDROGENASE 6)S.X.H.G.
0.5065.7Zm.13431.1.S1_atAY110841.1hypothetical LOC542282-2e+0At3g54940-S.X.H.G.
0.4455.7Zm.5579.1.A1_atCF630296fumarylacetoacetate hydrolase domain-containing protein 1-1e-1At3g16700fumarylacetoacetate hydrolase family proteinS.X.H.G.
0.4048.5Zm.584.4.S1_atAY104089.1pericarp color1-3e-8At4g38620MYB4S.X.H.G.
0.3336.0Zm.1208.4.S1_x_atBU197444Histone H4-4e-13At3g46320histone H4S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
80.9100.0GSM320470protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
48.9100.0GSM320467protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
30.399.8GSM320466protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
29.599.8GSM320468protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.299.6GSM320469protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.799.1GSM320465protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.196.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.096.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.596.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.995.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.086e-444Zm.1328.1.A1_atBE123333hypothetical protein LOC100272635-2e-6At2g36290hydrolase, alpha/beta fold family proteinC.G.S.X.
0.033e+032ZmAffx.740.1.A1_atAI740113hypothetical protein LOC100192706-3e+0At3g53630unknown proteinC.G.S.X.
0.033e+032ZmAffx.740.1.S1_atAI740113Hypothetical protein LOC100192706-3e+0At3g53630unknown proteinC.G.S.X.
0.013e+032Zm.6307.1.A1_atAI691328--7e-32At2g39770CYT1 (CYTOKINESIS DEFECTIVE 1)C.G.S.X.
0.011e+130Zm.701.1.A1_a_atCA40393426S proteasome non-ATPase regulatory subunit 3 /// 26S proteasome non-ATPase regulatory subunit 3-2e-8At1g7599026S proteasome regulatory subunit S3, putative (RPN3)C.G.S.X.
0.011e+130Zm.5017.1.S1_atBM072931dynamin-related protein 1C-5e-46At1g14830ADL1C (ARABIDOPSIS DYNAMIN-LIKE PROTEIN 1C)C.G.S.X.
0.011e+130Zm.445.1.S1_atAF329371.1Lipoxygenase-6e-3At3g22400LOX5C.G.S.X.
0.011e+130Zm.3015.1.S2_atAW066558hypothetical protein LOC100272395-2e-154At1g54270EIF4A-2C.G.S.X.
0.011e+130Zm.3015.1.S1_a_atU73459.1translational initiation factor eIF-4A-2e-154At1g54270EIF4A-2C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.024e-136Arabidopsis thalianaAt1g71930843524VND7 (VASCULAR RELATED NAC-DOMAIN PROTEIN 7)Encodes a NAC-domain transcription factor with transcriptional activation activity that is involved in xylem formation. Induces transdifferentiation of various cells into protoxylem vessel elements. Located in the nucleus. Expression induced in the presence of auxin, cytokinin and brassinosteroids.---C.G.S.X.
0.038e+032Glycine maxPsAffx.C197000019_atPsAffx.C197000019--1e+0At4g35490MRPL11 (MITOCHONDRIAL RIBOSOMAL PROTEIN L11)C.G.S.X.
0.081e-1169Hordeum vulgareContig14798_atContig14798--2e-1At2g36290hydrolase, alpha/beta fold family proteinC.G.S.X.
0.043e+034Oryza sativaOsAffx.29413.1.S1_at---0C.G.S.X.
0.032e+034Populus trichocarpaPtpAffx.104180.1.S1_atAJ780277hypothetical protein-3e+0At1g63970ISPFC.G.S.X.
0.036e+032Triticum aestivumTa.27882.2.S1_x_atCA677115--1e+0Atmg00150-C.G.S.X.
0.032e+032Vitis vinifera1610695_atCB972676hypothetical protein LOC100254279-3e-1At4g13540unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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