Gene omics information

Query gene ID Zm.1094.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8395.6Zm.1094.1.A1_atBM339500--2e-5At5g26210AL4 (ALFIN-LIKE 4)S.X.H.G.
0.6077.8Zm.17818.1.A1_atCK145213--6e+0At5g52470FIB1 (FIBRILLARIN 1)S.X.H.G.
0.5775.1ZmAffx.1081.1.S1_atAI948368--1e+1At5g23950C2 domain-containing proteinS.X.H.G.
0.4455.7ZmAffx.758.1.S1_atAI746000--3e-3At4g22260IM (IMMUTANS)S.X.H.G.
0.4048.5ZmAffx.406.9.A1_atAI670512--1e+1At5g16580BGLU2 (BETA GLUCOSIDASE 2)S.X.H.G.
0.2014.2Zm.9508.1.A1_atBM351117--9e-3At5g28040transcription regulatorS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.797.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.296.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.296.9GSM253281ZM_8d_SG200_3Alu_IIGSE10023Maize gene expression during infection with Ustilago maydis
5.196.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.196.8GSM202298B73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.996.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.596.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.496.2GSM253282ZM_8d_SG200_3Alu_IIIGSE10023Maize gene expression during infection with Ustilago maydis
4.296.0GSM253280ZM_8d_SG200_3Alu_IGSE10023Maize gene expression during infection with Ustilago maydis
4.296.0GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.114e-2097Zm.1180.1.S1_atBE512002PHD finger protein-1e-8At5g26210AL4 (ALFIN-LIKE 4)C.G.S.X.
0.102e-1891Zm.6475.2.A1_a_atCO531953hypothetical protein LOC100273857 /// PHD finger protein-3e-21At1g14510AL7 (ALFIN-LIKE 7)C.G.S.X.
0.102e-1891Zm.6475.2.A1_atCO531953hypothetical protein LOC100273857-3e-21At1g14510AL7 (ALFIN-LIKE 7)C.G.S.X.
0.102e-1891Zm.6475.3.S1_atAI737301PHD finger protein-3e-18At2g02470AL6 (ALFIN-LIKE 6)C.G.S.X.
0.105e-1683Zm.16858.1.S1_atAY103945.1PHD finger protein-1e-2At1g14510AL7 (ALFIN-LIKE 7)C.G.S.X.
0.071e-1375Zm.14176.1.A1_atCO532657hypothetical protein LOC100192074-4e-8At5g26210AL4 (ALFIN-LIKE 4)C.G.S.X.
0.105e-1373Zm.2333.1.S1_atAY104096.1hypothetical protein LOC100192747-2e-1At5g20510AL5 (ALFIN-LIKE 5)C.G.S.X.
0.105e-1373Zm.1002.1.A1_atBM333976PHD finger protein-1e-5At3g42790AL3 (ALFIN-LIKE 3)C.G.S.X.
0.133e-1167Zm.1002.2.A1_atCD438956--3e-8At1g14510AL7 (ALFIN-LIKE 7)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.132e-550Arabidopsis thalianaAt5g26210832690AL4 (ALFIN-LIKE 4)AL4 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.---C.G.S.X.
0.161e-1067Glycine maxGmaAffx.41422.1.A1_atBU551177PHD3-2e-33At2g02470AL6 (ALFIN-LIKE 6)C.G.S.X.
0.162e-43174Hordeum vulgareContig10280_atContig10280--7e-22At5g20510AL5 (ALFIN-LIKE 5)C.G.S.X.
0.203e-64246Oryza sativaOs07g0608400AK109447.1-Zn-finger-like, PHD finger domain containingprotein1e-20At5g20510AL5 (ALFIN-LIKE 5)C.G.S.X.
0.132e-1273Populus trichocarpaPtpAffx.206371.1.S1_atpmrna12648hypothetical protein-3e-51At5g20510AL5 (ALFIN-LIKE 5)C.G.S.X.
0.175e-1891Triticum aestivumTa.28269.2.S1_atCA690589PHD zinc finger protein-4e-6At5g20510AL5 (ALFIN-LIKE 5)C.G.S.X.
0.171e-1581Vitis vinifera1608080_atCF510891hypothetical protein LOC100263503-2e-32At5g26210AL4 (ALFIN-LIKE 4)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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