Gene omics information

Query gene ID	Zm.10799.1.S1_at
Gene name	hypothetical protein LOC100192060
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.53	69.1	Zm.10799.1.S1_at	AY108939.1	hypothetical protein LOC100192060	-	3e+0	At5g20110	dynein light chain, putative	S.X.	H.G.	Please select
0.67	85.8	Zm.14566.1.S1_at	BM381341	photosystem II 11 kD protein	-	4e-1	At2g05510	glycine-rich protein	S.X.	H.G.	Please select
0.60	77.8	Zm.4541.1.S1_at	AY104176.1	hypothetical protein LOC100274427	-	5e-8	At5g67400	peroxidase 73 (PER73) (P73) (PRXR11)	S.X.	H.G.	Please select
0.55	71.6	Zm.6166.2.A1_at	CO529261	hypothetical protein LOC100278925	-	6e-2	At1g13870	DRL1 (DEFORMED ROOTS AND LEAVES 1)	S.X.	H.G.	Please select
0.46	58.4	Zm.13623.1.A1_at	AY107431.1	-	-	1e+0	At5g11600	unknown protein	S.X.	H.G.	Please select
0.33	36.0	Zm.10798.1.A1_at	CF003582	Hypothetical protein LOC100191405	-	1e-2	At1g26930	kelch repeat-containing F-box family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
9.1	98.2	GSM206333	Lower pulvinus 30 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
9.0	98.2	GSM206329	Right pulvinus control polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
9.0	98.2	GSM206321	Lower pulvinus 30 min total RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
9.0	98.2	GSM206330	Lower pulvinus 2 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
8.5	98.1	GSM206324	Upper pulvinus 2 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
7.7	97.9	GSM206311	Left pulvinus control total RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
7.4	97.8	GSM206323	Left pulvinus control polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
7.3	97.8	GSM206312	Upper pulvinus 2 min total RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
7.0	97.7	GSM206318	Lower pulvinus 2 min total RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
7.0	97.7	GSM206327	Upper pulvinus 30 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	9e-2	38	Zm.7091.2.A1_at	AY103838.1	Chlorophyll a/b-binding apoprotein CP24 precursor	-	2e-15	At1g15820	LHCB6 (LIGHT HARVESTING COMPLEX PSII SUBUNIT 6)	C.G.	S.X.	Please select
0.02	9e-2	38	Zm.7091.1.A1_at	U23190.1	Chlorophyll a/b-binding apoprotein CP24 precursor	-	3e-15	At1g15820	LHCB6 (LIGHT HARVESTING COMPLEX PSII SUBUNIT 6)	C.G.	S.X.	Please select
0.02	9e-2	38	Zm.7091.1.A1_x_at	U23190.1	chlorophyll a/b-binding apoprotein CP24 precursor	-	3e-15	At1g15820	LHCB6 (LIGHT HARVESTING COMPLEX PSII SUBUNIT 6)	C.G.	S.X.	Please select
0.02	9e-2	38	Zm.7091.2.S1_a_at	AY103838.1	chlorophyll a/b-binding apoprotein CP24 precursor	-	2e-15	At1g15820	LHCB6 (LIGHT HARVESTING COMPLEX PSII SUBUNIT 6)	C.G.	S.X.	Please select
0.01	9e-2	38	Zm.3042.1.A1_at	AY109410.1	-	-	3e-32	At3g05970	LACS6 (long-chain acyl-CoA synthetase 6)	C.G.	S.X.	Please select
0.01	9e-2	38	Zm.3042.1.S1_at	AY109410.1	-	-	6e-21	At5g27600	LACS7 (LONG-CHAIN ACYL-COA SYNTHETASE 7)	C.G.	S.X.	Please select
0.01	4e-1	36	Zm.1234.2.A1_at	AY105877.1	hypothetical protein LOC100193069	-	1e+1	At5g56840	DNA-binding family protein	C.G.	S.X.	Please select
0.01	4e-1	36	Zm.1234.1.A1_at	BM073436	vacuolar ATP synthase subunit D 1	-	5e-11	At3g58730	vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD)	C.G.	S.X.	Please select
0.01	4e-1	36	Zm.1234.1.A1_x_at	BM073436	vacuolar ATP synthase subunit D 1	-	5e-11	At3g58730	vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	3e+0	34	Arabidopsis thaliana	At5g20110	832133	dynein light chain, putative	F:microtubule motor activity;P:microtubule-based process;C:microtubule associated complex;MOPF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	8e-2	40	Glycine max	PsAffx.C106000016_at	PsAffx.C106000016	-	-	5e+0	At1g23710	unknown protein	C.G.	S.X.	Please select
0.17	7e-46	184	Hordeum vulgare	Contig5883_s_at	Contig5883	-	-	1e+0	At1g68280	thioesterase-related	C.G.	S.X.	Please select
0.63	0	646	Oryza sativa	Os03g0126000	AK121680.1	-	Glycosyl transferase, family 3 domain containingprotein	8e-1	At5g17990	TRP1 (tryptophan biosynthesis 1)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.07	2e-8	61	Populus trichocarpa	PtpAffx.210579.1.S1_at	pmrna20748	hypothetical protein	-	3e-39	At5g17990	TRP1 (tryptophan biosynthesis 1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.39	3e-176	619	Triticum aestivum	Ta.14885.1.S1_at	BT009555.1	-	-	2e+0	At4g10700	unknown protein	C.G.	S.X.	Please select
0.01	1e+0	34	Vitis vinifera	1620608_s_at	CD801046	-	-	3e-1	At4g30970	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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