CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.1079.6.A1_at

Gene name carbonic anhydrase

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 85.8 Zm.1079.6.A1_at CF634247 carbonic anhydrase - 5e-1 At1g56550 UDP-xylosyltransferase S.X. H.G.
0.73 89.9 Zm.652.1.S1_at AY029559.1 methyl binding domain - 2e-1 At5g17870 PSRP6 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 6) S.X. H.G.
0.67 85.8 Zm.6364.1.S1_at T20372 - - 8e-1 At2g22060 - S.X. H.G.
0.57 75.1 Zm.9745.1.A1_at BM341408 - - 2e+1 At5g24570 unknown protein S.X. H.G.
0.47 59.9 Zm.15780.1.A1_at CD484576 - - 4e+0 At3g01472 CPuORF33 (Conserved peptide upstream open reading frame 33) S.X. H.G.
0.47 59.9 Zm.19028.1.S1_at T18786 hypothetical protein LOC100192863 - 4e-2 At4g19270 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
8.0 98.0 GSM253269 ZM_4.5d_Mock_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
7.4 97.8 GSM253270 ZM_4.5d_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
6.7 97.6 GSM253268 ZM_4.5d_Mock_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
6.6 97.6 GSM253256 ZM_2d_Mock_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
5.4 97.0 GSM253264 ZM_4d_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
5.2 96.9 GSM320444 protocol: mRNA - genotype: CML69 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.1 96.8 GSM253263 ZM_4d_Mock_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
5.1 96.8 GSM253262 ZM_4d_Mock_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
5.1 96.8 GSM253258 ZM_2d_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
5.1 96.8 GSM320440 protocol: mRNA - genotype: B73 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.53 0 835 Zm.1079.3.A1_at BM347782 - - 3e-2 At1g23730 BCA3 (BETA CARBONIC ANHYDRASE 4) C.G. S.X.
0.37 0 759 Zm.1079.1.A1_a_at U08401.1 hypothetical protein LOC100275493 /// carbonic anhydrase /// carbonic anhydrase - 1e+0 At3g01500 CA1 (CARBONIC ANHYDRASE 1) C.G. S.X.
0.37 0 759 Zm.1079.1.A1_x_at U08401.1 hypothetical protein LOC100275493 - 1e+0 At3g01500 CA1 (CARBONIC ANHYDRASE 1) C.G. S.X.
0.28 0 743 Zm.1079.4.S1_at AY109373.1 - - 2e-2 At5g14740 CA2 (CARBONIC ANHYDRASE 2) C.G. S.X.
0.32 0 743 Zm.1079.4.A1_s_at BG842635 hypothetical protein LOC100274597 - 2e-2 At5g14740 CA2 (CARBONIC ANHYDRASE 2) C.G. S.X.
0.28 0 743 Zm.1079.4.S1_x_at AY109373.1 - - 2e-2 At5g14740 CA2 (CARBONIC ANHYDRASE 2) C.G. S.X.
0.43 2e-143 508 Zm.6151.1.A1_at BE519343 hypothetical protein LOC100274597 - 2e+0 At5g14740 CA2 (CARBONIC ANHYDRASE 2) C.G. S.X.
0.43 2e-143 508 Zm.6151.1.A1_s_at BE519343 hypothetical protein LOC100274597 - 2e+0 At5g14740 CA2 (CARBONIC ANHYDRASE 2) C.G. S.X.
0.27 1e-58 226 Zm.1079.5.A1_a_at M95073.1 - - 6e-3 At1g23730 BCA3 (BETA CARBONIC ANHYDRASE 4) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 5e-1 36 Arabidopsis thaliana At1g56550 842108 UDP-xylosyltransferase F:UDP-xylosyltransferase activity;P:biological_process unknown;C:endoplasmic reticulum;POM - - - C.G. S.X.
0.06 2e-1 38 Glycine max Gma.16585.1.S1_at CA850597 - - 6e-16 At1g70410 carbonic anhydrase, putative / carbonate dehydratase, putative C.G. S.X.
0.43 3e-112 404 Hordeum vulgare Contig897_s_at Contig897 carbonic anhydrase - 2e+0 At4g18570 proline-rich family protein C.G. S.X.
0.42 4e-136 486 Oryza sativa Os01g0639900 AF182806.1 - Carbonic anhydrase, chloroplast precursor (EC4.2.1.1) (Carbonate dehydratase) 6e-1 At1g50390 fructokinase-related C.G. S.X.
0.03 7e-1 36 Populus trichocarpa PtpAffx.212204.1.S1_at pmrna23924 hypothetical protein - 2e+0 At5g39540 - C.G. S.X.
0.40 3e-67 256 Triticum aestivum TaAffx.12182.1.S1_at BJ283583 - - 2e+0 At5g14740 CA2 (CARBONIC ANHYDRASE 2) C.G. S.X.
0.03 2e-1 36 Vitis vinifera 1620022_at CF413848 - - 1e+1 At4g01995 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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