CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.10467.1.S1_at

Gene name hypothetical protein LOC100274742

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.53 69.1 Zm.10467.1.S1_at CA826991 hypothetical protein LOC100274742 - 1e+0 At2g27580 zinc finger (AN1-like) family protein S.X. H.G.
0.80 94.0 Zm.19149.1.S1_at CO526376 hypothetical protein LOC100272365 - 2e-1 At3g44020 thylakoid lumenal P17.1 protein S.X. H.G.
0.75 90.8 Zm.11685.1.A1_at BM379931 hypothetical protein LOC100194378 - 3e-1 At1g72645 unknown protein S.X. H.G.
0.74 90.3 Zm.3642.1.A1_at CA404841 hypothetical protein LOC100273944 - 1e-1 At1g63522 - S.X. H.G.
0.74 90.3 ZmAffx.135.1.A1_at AI667706 purine permease - 3e+0 At2g43540 unknown protein S.X. H.G.
0.71 88.2 Zm.5314.1.A1_at CF637974 transcription initiation factor IIF, alpha subunit - 4e-11 At4g12610 transcription initiation factor IIF alpha subunit (TFIIF-alpha) family protein S.X. H.G.
0.67 85.8 Zm.11811.1.S1_at CF052353 glycosyltransferase 5 /// glycosyltransferase 5 - 3e-10 At3g62720 XT1 (XYLOSYLTRANSFERASE 1) S.X. H.G.
0.61 79.5 ZmAffx.535.1.S1_at AI711782 - - 2e-1 At1g23270 unknown protein S.X. H.G.
0.52 67.3 Zm.8561.1.A1_at BM336075 - - 1e-3 At1g02070 unknown protein S.X. H.G.
0.48 61.3 Zm.18100.2.S1_at BM380336 hypothetical protein LOC100191739 - 6e+0 At1g03700 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
46.2 100.0 GSM320455 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
40.6 99.9 GSM320454 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
26.3 99.7 GSM320453 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.1 99.4 GSM320450 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.5 99.4 GSM320448 protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.5 99.4 GSM320449 protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.7 99.0 GSM320451 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.1 98.6 GSM320452 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.2 98.5 GSM320447 protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.5 98.3 GSM320464 protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e-1 36 Zm.7780.1.A1_at CD433445 hypothetical protein LOC100274595 - 1e-7 At4g19230 CYP707A1 C.G. S.X.
0.02 2e-1 36 Zm.7780.1.S1_at CD433445 - - 1e-7 At4g19230 CYP707A1 C.G. S.X.
0.02 2e-1 36 Zm.7364.1.A1_at BM078096 - - 2e+0 At5g25750 unknown protein C.G. S.X.
0.01 2e-1 36 Zm.12504.1.S1_at AY105770.1 hypothetical protein LOC100274017 - 4e-3 At5g47720 acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative C.G. S.X.
0.02 6e-1 34 Zm.6532.6.A1_at CK370644 hypothetical protein LOC100272908 /// abscisic stress ripening protein 2 /// abscisic stress ripening protein 2 - 1e-1 At1g62060 unknown protein C.G. S.X.
0.01 6e-1 34 Zm.4035.1.A1_at AI834003 hypothetical protein LOC100279841 - 9e-4 At3g11110 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.02 2e+0 32 Zm.9813.1.A1_at BM333784 serine esterase family protein - 2e+0 At5g51180 unknown protein C.G. S.X.
0.02 2e+0 32 Zm.3554.3.A1_at BM335933 ribosomal protein L9, N-terminal domain containing protein - 4e-1 At5g53070 ribosomal protein L9 family protein C.G. S.X.
0.02 2e+0 32 Zm.3032.1.A1_at AW134461 AP-1 complex subunit sigma-2 - 1e-7 At4g35410 clathrin adaptor complex small chain family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 34 Arabidopsis thaliana At2g27580 817304 zinc finger (AN1-like) family protein F:DNA binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MPOVF - - - C.G. S.X.
0.03 5e-1 36 Glycine max GmaAffx.10491.1.S1_at AW598141 - - 3e+0 At3g60290 oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors C.G. S.X.
0.10 3e-3 42 Hordeum vulgare Contig10503_at Contig10503 - - 1e-2 At5g53180 PTB2 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 2) C.G. S.X.
0.11 2e-16 87 Oryza sativa Os07g0508200 AK069914.1 - Hypothetical protein 2e-1 At1g54215 proline-rich family protein C.G. S.X.
0.03 2e+0 34 Populus trichocarpa PtpAffx.200833.1.S1_x_at pmrna1624 hypothetical protein - 1e-3 At1g26250 proline-rich extensin, putative C.G. S.X.
0.05 3e-5 50 Triticum aestivum Ta.10983.1.S1_a_at BQ166964 - - 3e+0 At3g53530 heavy-metal-associated domain-containing protein C.G. S.X.
0.02 7e+0 30 Vitis vinifera 1617752_at CF207692 hypothetical protein LOC100259548 - 4e+0 At5g44973 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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