Gene omics information

Query gene ID	Zm.10423.1.S1_at
Gene name	fatty acid desaturase8
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.61	79.5	Zm.10423.1.S1_at	CN844467	fatty acid desaturase8	-	6e-14	At5g05580	FAD8 (FATTY ACID DESATURASE 8)	S.X.	H.G.	Please select
0.68	86.1	Zm.3707.1.A1_at	AY107773.1	vacuolar cation/proton exchanger 2	-	1e-4	At3g13320	CAX2 (CATION EXCHANGER 2)	S.X.	H.G.	Please select
0.65	82.1	Zm.737.2.A1_at	AI746142	-	-	4e-6	At5g60360	AALP (Arabidopsis aleurain-like protease)	S.X.	H.G.	Please select
0.64	81.7	Zm.2678.1.A1_at	BM339111	hypothetical protein LOC100193236	-	2e-1	At1g05180	AXR1 (AUXIN RESISTANT 1)	S.X.	H.G.	Please select
0.61	79.5	Zm.4549.1.A1_at	CK144436	hypothetical protein LOC100272569	-	1e-6	At5g55530	C2 domain-containing protein	S.X.	H.G.	Please select
0.60	77.8	Zm.18474.1.A1_at	CO531196	hypothetical protein LOC100192651	-	6e+0	At5g61997	unknown protein	S.X.	H.G.	Please select
0.58	75.1	Zm.6439.2.A1_at	AI881500	eucaryotic initiation factor7	-	7e-14	At5g35620	LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1)	S.X.	H.G.	Please select
0.55	71.6	Zm.375.1.S1_at	AF057184.1	trypsin inhibitor	-	1e-1	At5g02440	unknown protein	S.X.	H.G.	Please select
0.54	69.8	Zm.1967.2.A1_at	CF637323	pre-mRNA-splicing factor prp45	-	6e-26	At1g77180	chromatin protein family	S.X.	H.G.	Please select
0.51	66.4	Zm.18125.1.S1_at	CN844337	-	-	4e-1	At3g47380	invertase/pectin methylesterase inhibitor family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
12.6	98.7	GSM253269	ZM_4.5d_Mock_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
11.8	98.6	GSM253270	ZM_4.5d_Mock_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
11.4	98.5	GSM253268	ZM_4.5d_Mock_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
9.9	98.3	GSM253256	ZM_2d_Mock_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
9.8	98.3	GSM253257	ZM_2d_Mock_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
9.6	98.3	GSM253258	ZM_2d_Mock_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
6.3	97.4	GSM253263	ZM_4d_Mock_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
5.4	97.0	GSM253262	ZM_4d_Mock_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
4.5	96.3	GSM202406	Zmet2 study 11-day seedling aerial tissue genotype Mo17 Rep2	GSE8188	Expression profiling of zmet2-m1 mutants relative to wild-type
4.1	95.9	GSM253259	ZM_2d_SG200_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.69	0	1439	Zm.151.1.A1_at	AY107103.1	fatty acid desaturase7	-	7e-29	At5g05580	FAD8 (FATTY ACID DESATURASE 8)	C.G.	S.X.	Please select
0.01	4e-1	36	Zm.622.1.S1_at	AF342809.1	tonoplast membrane integral protein ZmTIP3-2	-	4e-2	At2g01340	unknown protein	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.13752.1.S1_at	AY105902.1	serine palmitoyltransferase 2	-	2e-18	At5g23670	LCB2	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.1297.1.S1_at	BE345371	hypothetical protein LOC100276762	-	1e+0	At1g23670	unknown protein	C.G.	S.X.	Please select
0.01	1e+0	34	Zm.12825.1.S1_at	CA402807	-	-	4e-2	At2g36830	GAMMA-TIP (GAMMA TONOPLAST INTRINSIC PROTEIN)	C.G.	S.X.	Please select
0.02	1e+0	34	Zm.10313.1.S1_at	AY082396.1	knotted1-interacting protein	-	2e-7	At2g16400	BLH7 (bell1-like homeodomain 7)	C.G.	S.X.	Please select
0.01	6e+0	32	Zm.9920.1.A1_at	CF349248	hypothetical protein LOC100193214	-	1e+0	At5g64180	unknown protein	C.G.	S.X.	Please select
0.01	6e+0	32	Zm.6358.1.S1_at	CA402045	hypothetical protein LOC100273975 /// hypothetical protein LOC100274514	-	5e-18	At5g61840	GUT1	C.G.	S.X.	Please select
0.01	6e+0	32	Zm.400.2.A1_at	AI677573	hypothetical protein LOC100193944	-	3e-28	At3g06483	PDK (PYRUVATE DEHYDROGENASE KINASE)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.21	6e-14	79	Arabidopsis thaliana	At5g05580	830441	FAD8 (FATTY ACID DESATURASE 8)	Encodes a temperature sensitive plastidic fatty acid desaturase.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.10	9e-14	79	Glycine max	Gma.10564.1.S1_at	AY204711.1	microsomal omega-3-fatty acid desaturase	-	3e-15	At5g05580	FAD8 (FATTY ACID DESATURASE 8)	C.G.	S.X.	Please select
0.52	0	769	Hordeum vulgare	Contig6725_at	Contig6725	-	-	3e-40	At5g05580	FAD8 (FATTY ACID DESATURASE 8)	C.G.	S.X.	Please select
0.48	0	753	Oryza sativa	Os03g0290300	AK058242.1	-	Fatty acid desaturase domain containing protein	8e-37	At5g05580	FAD8 (FATTY ACID DESATURASE 8)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.16	3e-7	57	Populus trichocarpa	PtpAffx.206319.1.S1_at	pmrna12545	hypothetical protein	-	4e-49	At3g11170	FAD7 (FATTY ACID DESATURASE 7)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.47	5e-141	502	Triticum aestivum	Ta.24254.1.S1_a_at	CA616263	-	-	1e-39	At5g05580	FAD8 (FATTY ACID DESATURASE 8)	C.G.	S.X.	Please select
0.06	3e-16	85	Vitis vinifera	1619526_at	CF209847	hypothetical protein LOC100247097	-	1e-48	At3g11170	FAD7 (FATTY ACID DESATURASE 7)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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