CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.10376.1.S1_at

Gene name

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.53 69.1 Zm.10376.1.S1_at BQ538350 - - 2e-11 At3g13510 unknown protein S.X. H.G.
0.70 87.0 Zm.3358.2.S1_at AY105740.1 - - 7e+0 At2g44420 protein N-terminal asparagine amidohydrolase family protein S.X. H.G.
0.69 86.5 Zm.7826.2.A1_at AY107684.1 - - 5e+0 At4g22517 - S.X. H.G.
0.64 81.7 Zm.18351.1.S1_at CO529439 - - 2e+0 At2g21140 ATPRP2 (PROLINE-RICH PROTEIN 2) S.X. H.G.
0.60 77.8 Zm.5022.1.S1_at BM074052 hypothetical protein LOC100279516 - 1e-17 At1g67800 copine-related S.X. H.G.
0.54 69.8 Zm.18352.1.S1_at CO527044 glucan endo-1,3-beta-glucosidase, acidic isoform - 1e+1 At5g62470 MYB96 (myb domain protein 96) S.X. H.G.
0.53 69.1 Zm.6149.1.A1_at CA399198 omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 - 9e-1 At5g43070 WPP1 (WPP domain protein 1) S.X. H.G.
0.52 67.3 Zm.16982.1.A1_at CF972418 - - 3e-10 At3g44340 CEF (clone eighty-four) S.X. H.G.
0.50 65.7 Zm.5165.1.A1_at AI715001 gpm6 protein - 5e+0 At5g03850 40S ribosomal protein S28 (RPS28B) S.X. H.G.
0.34 37.2 Zm.14349.1.S1_at CO532249 hypothetical protein LOC100272339 - 3e+0 At5g16010 3-oxo-5-alpha-steroid 4-dehydrogenase family protein / steroid 5-alpha-reductase family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
6.8 97.6 GSM202298 B73 immature ear tissue, biological replicate 2 GSE8176 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
6.7 97.6 GSM202292 B73 immature ear tissue, biological replicate 1 GSE8176 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.5 97.1 GSM202304 B73 immature ear tissue, biological replicate 3 GSE8176 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.4 97.0 GSM202295 Mo17xB73 immature ear tissue, biological replicate 1 GSE8176 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.1 96.8 GSM202299 Mo17xB73 immature ear tissue, biological replicate 2 GSE8176 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.1 96.8 GSM206307 Lower pulvinus 5 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.8 96.6 GSM202302 B73xMo17 immature ear tissue, biological replicate 2 GSE8176 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.6 96.4 GSM202296 B73xMo17 immature ear tissue, biological replicate 1 GSE8176 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.5 96.3 GSM320453 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.4 96.2 GSM206300 Upper pulvinus 2 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.46 2e-157 555 Zm.18312.1.S1_at CK827776 hypothetical protein LOC100279515 - 7e-17 At3g13510 unknown protein C.G. S.X.
0.05 1e-7 57 Zm.10621.1.A1_at CF245020 carboxyl-terminal proteinase - 2e+1 At5g18290 SIP1 C.G. S.X.
0.10 2e-6 54 Zm.18964.1.S1_at CO533873 hypothetical protein LOC100194165 - 8e+0 At4g33560 unknown protein C.G. S.X.
0.13 3e-5 50 Zm.857.1.S1_at CF624024 - - 1e-1 At5g50150 unknown protein C.G. S.X.
0.01 2e-3 44 Zm.4468.3.S1_at CF627497 phospho-2-dehydro-3-deoxyheptonate aldolase 1 - 4e-37 At1g22410 2-dehydro-3-deoxyphosphoheptonate aldolase, putative / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, putative / DAHP synthetase, putative C.G. S.X.
0.02 6e-3 42 Zm.6334.1.A1_at AY108462.1 hypothetical protein LOC100279181 - 5e+0 At2g29840 protein binding / zinc ion binding C.G. S.X.
0.01 3e-2 40 Zm.4369.1.A1_a_at CA402639 hypothetical protein LOC100276142 - 9e-1 At4g06746 RAP2.9 (related to AP2 9) C.G. S.X.
0.02 1e-1 38 Zm.7598.1.A1_at CF629653 - - 3e-3 At2g40510 40S ribosomal protein S26 (RPS26A) C.G. S.X.
0.02 1e-1 38 Zm.12031.1.A1_at BM382777 - - 2e+1 At5g05650 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.15 2e-11 71 Arabidopsis thaliana At3g13510 820553 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;PFB - - - C.G. S.X.
0.27 6e-15 83 Glycine max Gma.2172.2.S1_a_at BI426425 - - 1e-145 At1g55360 unknown protein C.G. S.X.
0.39 1e-93 343 Hordeum vulgare Contig5275_at Contig5275 - - 3e-22 At3g13510 unknown protein C.G. S.X.
0.44 0 902 Oryza sativa Os07g0573400 AK121705.1 - Protein of unknown function DUF239 domaincontaining protein 8e-42 At3g13510 unknown protein C.G. S.X.
0.18 7e-27 123 Populus trichocarpa PtpAffx.8523.1.S1_at CV239620 hypothetical protein - 9e-106 At1g55360 unknown protein C.G. S.X.
0.43 2e-150 533 Triticum aestivum Ta.30520.1.S1_at CA635767 - - 8e-20 At1g55360 unknown protein C.G. S.X.
0.09 9e-20 97 Vitis vinifera 1620804_at CD797824 hypothetical protein LOC100267227 - 3e-114 At1g55360 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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