CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.10209.1.A1_at

Gene name hypothetical protein LOC100191339

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 85.8 Zm.10209.1.A1_at CD444477 hypothetical protein LOC100191339 - 5e-2 At4g11700 unknown protein S.X. H.G.
0.33 36.0 Zm.7167.1.A1_at BU050804 membrane protein - 4e-7 At1g27350 - S.X. H.G.
0.23 18.6 Zm.8402.1.A1_at BM073969 - - 2e-18 At1g30330 ARF6 (AUXIN RESPONSE FACTOR 6) S.X. H.G.
0.20 14.2 Zm.8926.2.S1_at BM350553 Hypothetical protein LOC100192920 - 3e-1 At4g15150 glycine-rich protein S.X. H.G.
0.14 7.7 Zm.6501.1.A1_at CD441294 - - 1e-1 At2g46640 unknown protein S.X. H.G.
0.10 4.6 Zm.4119.1.S1_at AI854985 ATP binding protein - 2e-4 At3g09010 protein kinase family protein S.X. H.G.
0.10 4.6 Zm.18063.1.A1_at CK986147 - - 2e-1 At3g53611 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
14.7 98.9 GSM206324 Upper pulvinus 2 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
13.2 98.8 GSM206317 Right pulvinus control total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
13.1 98.7 GSM206329 Right pulvinus control polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
12.9 98.7 GSM206330 Lower pulvinus 2 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
12.3 98.7 GSM206327 Upper pulvinus 30 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
12.1 98.6 GSM206311 Left pulvinus control total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
11.9 98.6 GSM206323 Left pulvinus control polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
11.8 98.6 GSM206315 Upper pulvinus 30 min total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
11.4 98.5 GSM206333 Lower pulvinus 30 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
10.8 98.5 GSM206312 Upper pulvinus 2 min total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.40 8e-42 171 Zm.5898.1.A1_at CF631996 hyoscyamine 6-dioxygenase - 2e-1 At1g80610 unknown protein C.G. S.X.
0.02 3e-4 46 Zm.3184.1.A1_at AY105651.1 gibberellin 20-oxidase - 5e-2 At5g07200 YAP169 C.G. S.X.
0.01 2e-2 40 Zm.283.1.S1_at AY254104.1 benzoxazinless1 - 5e-2 At4g01220 - C.G. S.X.
0.02 3e-1 36 Zm.13480.1.S1_at AY108935.1 gibberellin 20 oxidase 2 - 3e-3 At3g12900 oxidoreductase, 2OG-Fe(II) oxygenase family protein C.G. S.X.
0.02 1e+0 34 ZmAffx.821.1.A1_at AI770497 - - 3e+0 At3g21840 ASK7 (ARABIDOPSIS SKP1-LIKE 7) C.G. S.X.
0.02 1e+0 34 ZmAffx.821.1.S1_at AI770497 heat shock 70 kDa protein 4 - 3e+0 At3g21840 ASK7 (ARABIDOPSIS SKP1-LIKE 7) C.G. S.X.
0.01 1e+0 34 Zm.774.1.S1_at CF625446 hypothetical protein LOC100191508 - 2e-17 At4g14160 transport protein, putative C.G. S.X.
0.01 1e+0 34 Zm.4381.1.A1_at BG266035 metal ion binding protein - 2e-6 At2g28660 copper-binding family protein C.G. S.X.
0.01 1e+0 34 Zm.1296.1.S1_at CF623659 hypothetical protein LOC100193371 - 7e-4 At5g62460 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 5e-2 40 Arabidopsis thaliana At4g11700 826775 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.02 1e+0 36 Glycine max PsAffx.C70000043_at PsAffx.C70000043 - - 9e-1 At2g19045 RALFL13 (RALF-LIKE 13) C.G. S.X.
0.40 4e-47 188 Hordeum vulgare Contig11699_at Contig11699 - - 2e-3 At5g05600 oxidoreductase, 2OG-Fe(II) oxygenase family protein C.G. S.X.
0.31 2e-39 165 Oryza sativa Os07g0169600 AK121818.1 - 2OG-Fe(II) oxygenase domain containing protein 2e-1 At2g35640 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.02 1e+0 36 Populus trichocarpa PtpAffx.417.3.A1_a_at CV259584 cytochrome P450 /// cytochrome P450 /// hypothetical protein - 3e-1 At3g44970 cytochrome P450 family protein C.G. S.X.
0.39 8e-44 178 Triticum aestivum Ta.8640.1.S1_a_at BQ807183 - - 6e-1 At1g30040 ATGA2OX2 (GIBBERELLIN 2-OXIDASE) C.G. S.X.
0.02 3e+0 32 Vitis vinifera 1619392_at CF513478 hypothetical protein LOC100259847 - 4e+0 At3g24060 self-incompatibility protein-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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