CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.10175.1.A1_at

Gene name hypothetical protein LOC100279966 /// pathogenesis-related protein 10

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.60 77.8 Zm.10175.1.A1_at BM379420 hypothetical protein LOC100279966 /// pathogenesis-related protein 10 - 7e+0 At4g18692 unknown protein S.X. H.G.
0.43 52.8 Zm.3773.1.S1_at AY110209.1 hypothetical protein LOC100193094 - 4e+0 At4g18620 - S.X. H.G.
0.43 52.8 Zm.2715.1.A1_at AW066985 - - 5e+0 At4g12990 unknown protein S.X. H.G.
0.35 38.9 Zm.5962.1.S1_a_at AY241545.1 glyoxalase I - 1e-17 At1g11840 ATGLX1 (GLYOXALASE I HOMOLOG) S.X. H.G.
0.29 28.1 Zm.13760.1.A1_at AY105817.1 - - 5e+0 At5g27280 zinc finger (DNL type) family protein S.X. H.G.
0.26 22.7 Zm.4860.2.A1_at AI770577 - - 3e+0 At2g34140 Dof-type zinc finger domain-containing protein S.X. H.G.
0.21 15.5 Zm.4823.1.A1_at CD999070 - - 4e-23 At1g76550 pyrophosphate--fructose-6-phosphate 1-phosphotransferase alpha subunit, putative / pyrophosphate-dependent 6-phosphofructose-1-kinase, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
26.5 99.7 GSM253279 ZM_8d_SG200_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
25.4 99.6 GSM385709 Deep-sowing 10d treatment TIBA, biological rep1 GSE15371 Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
24.8 99.6 GSM253278 ZM_8d_SG200_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
24.6 99.6 GSM385710 Deep-sowing 10d treatment TIBA, biological rep2 GSE15371 Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
24.1 99.6 GSM323172 Zm_SG200Dpep1_24hpi_III GSE12892 Maize gene expression during infection with Ustilago maydis strain SG200Dpep1
17.0 99.1 GSM253265 ZM_4d_SG200_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
14.6 98.9 GSM253246 ZM_12h_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
12.8 98.7 GSM253249 ZM_12h_SG200_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
12.6 98.7 GSM323170 Zm_SG200Dpep1_24hpi_I GSE12892 Maize gene expression during infection with Ustilago maydis strain SG200Dpep1
11.3 98.5 GSM253266 ZM_4d_SG200_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 5e-2 38 Zm.3085.1.S1_at AF440227.1 histone acetyl transferase GNAT/MYST 101 - 5e-27 At3g54610 GCN5 C.G. S.X.
0.04 2e-1 36 Zm.702.1.A1_at BG842267 bHLH transcription factor GBOF-1 - 1e+0 At2g18620 geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative C.G. S.X.
0.02 2e-1 36 Zm.5862.1.A1_at BM333410 50S ribosomal protein L18 - 5e-4 At1g48350 ribosomal protein L18 family protein C.G. S.X.
0.01 2e-1 36 Zm.271.1.S1_at L44133.1 rough sheath1 - 4e-15 At4g08150 KNAT1 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA) C.G. S.X.
0.02 2e-1 36 Zm.18374.1.A1_at CO521737 hypothetical protein LOC100191144 - 1e-1 At1g21890 nodulin MtN21 family protein C.G. S.X.
0.03 8e-1 34 ZmAffx.62.1.A1_at AI665108 coronatine-insensitive protein 1 - 3e+0 At2g01370 DNA-binding storekeeper protein-related C.G. S.X.
0.03 8e-1 34 ZmAffx.62.1.S1_at AI665108 - - 3e+0 At2g01370 DNA-binding storekeeper protein-related C.G. S.X.
0.02 8e-1 34 Zm.771.1.S1_at BM499109 - - 6e+0 At4g04620 ATG8B (autophagy 8b) C.G. S.X.
0.02 8e-1 34 Zm.7391.1.A1_at BM333950 elongation factor P - 5e-1 At3g13227 serine-rich protein-related C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 7e+0 32 Arabidopsis thaliana At4g18692 6240656 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.03 2e-1 38 Glycine max GmaAffx.90753.1.S1_s_at CF806478 - - 1e+0 At5g49300 zinc finger (GATA type) family protein C.G. S.X.
0.13 2e-8 59 Hordeum vulgare Contig4406_x_at Contig4406 - - 2e+0 At4g25110 AtMC2 (metacaspase 2) C.G. S.X.
0.09 2e-4 48 Oryza sativa Os12g0555000 AB127580.1 - Bet v I allergen family protein 6e+0 At5g64310 AGP1 (ARABINOGALACTAN PROTEIN 1) C.G. S.X.
0.03 1e+1 32 Populus trichocarpa PtpAffx.76158.1.A1_at CV276299 - - 4e+0 At5g63300 structural constituent of ribosome C.G. S.X.
0.60 0 634 Triticum aestivum TaAffx.58548.1.S1_at CA618672 - - 1e+1 At5g03750 - C.G. S.X.
0.02 2e+0 32 Vitis vinifera 1608603_at BQ795705 hypothetical LOC100242108 - 3e-13 At5g54160 ATOMT1 (O-METHYLTRANSFERASE 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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