Gene omics information

Query gene ID Zm.10135.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0Zm.10135.1.A1_atBM381166--1e+0At5g47550cysteine protease inhibitor, putative / cystatin, putativeS.X.H.G.
0.7792.1Zm.18405.1.A1_atCO521227hypothetical protein LOC100193248-3e+0At5g01881unknown proteinS.X.H.G.
0.7389.9Zm.5919.1.S1_atAI795365--4e-2At1g59750ARF1 (AUXIN RESPONSE FACTOR 1)S.X.H.G.
0.3641.3Zm.18281.1.S1_atBG840860hypothetical protein LOC100277869-5e-1At1g56530hydroxyproline-rich glycoprotein family proteinS.X.H.G.
0.3641.3Zm.2076.2.A1_atCF634644hypothetical protein LOC100194265-2e-3At3g0423040S ribosomal protein S16 (RPS16B)S.X.H.G.
0.2622.7Zm.15975.1.A1_atAY109347.1--5e-2At4g17560ribosomal protein L19 family proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
37.799.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
30.599.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.498.7GSM290555CCR mutant M1 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
9.998.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.097.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.997.3GSM202298B73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.697.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.896.6GSM375788Deep-sowing 10d treatment Control, biological rep1GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
4.696.4GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.195.9GSM320459protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.102e-652Zm.17990.1.A1_atBG837629--2e+0At5g54460wound-responsive protein-relatedC.G.S.X.
0.102e-652Zm.17990.1.S1_atBG837629hypothetical protein LOC100275286-2e+0At5g54460wound-responsive protein-relatedC.G.S.X.
0.042e-342Zm.166.2.S1_atAI664966Pyruvate decarboxylase1-3e+0At5g65080MAF5 (MADS AFFECTING FLOWERING 5)C.G.S.X.
0.042e-342Zm.166.2.A1_a_atAI664966pyruvate decarboxylase1-3e+0At5g65080MAF5 (MADS AFFECTING FLOWERING 5)C.G.S.X.
0.027e-340Zm.5292.1.A1_a_atBM074771--2e-7At5g23750remorin family proteinC.G.S.X.
0.017e-340Zm.5275.1.A1_atCF011385hypothetical protein LOC100192527-5e-9At1g13640phosphatidylinositol 3- and 4-kinase family proteinC.G.S.X.
0.037e-340Zm.10088.1.A1_atBM379209remorin-3e-2At2g45820DNA-binding protein, putativeC.G.S.X.
0.043e-238Zm.8233.3.S1_a_atBQ294345hypothetical protein LOC100194283 /// splicing factor, arginine/serine-rich 7-5e-7At4g31580SRZ-22C.G.S.X.
0.043e-238Zm.8233.3.S1_x_atBQ294345hypothetical protein LOC100194283-5e-7At4g31580SRZ-22C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e+034Arabidopsis thalianaAt5g47550834805cysteine protease inhibitor, putative / cystatin, putativeF:cysteine-type endopeptidase inhibitor activity;P:biological_process unknown;C:cell wall;PMOB---C.G.S.X.
0.052e-240Glycine maxPsAffx.psHB036xF02f_s_atPsAffx.psHB036xF02f--6e-1At5g47550cysteine protease inhibitor, putative / cystatin, putativeC.G.S.X.
0.151e-41169Hordeum vulgareContig11805_atContig11805--5e+0At4g14819unknown proteinC.G.S.X.
Os10g04173000.218e-40Oryza sativaOs10g04172009638.m02378--3e+0At2g07521unknown proteinC.G.S.X.
0.069e-238Populus trichocarpaPtpAffx.218919.1.S1_atpmrna34676hypothetical protein-2e+0At1g20790F-box family proteinC.G.S.X.
0.187e-42171Triticum aestivumTaAffx.131679.1.S1_atCA685240--1e+0At4g36750quinone reductase family proteinC.G.S.X.
0.041e+032Vitis vinifera1616908_atCB347140--6e-2At1g01680U-box domain-containing proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage