CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.10133.1.A1_at

Gene name ruBisCO large subunit-binding protein subunit beta

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.86 96.3 Zm.10133.1.A1_at CD441295 ruBisCO large subunit-binding protein subunit beta - 2e-60 At1g55490 CPN60B (CHAPERONIN 60 BETA) S.X. H.G.
0.46 58.4 Zm.9039.1.A1_at BM078424 hypothetical protein LOC100193374 - 5e-1 At1g55310 SR33 S.X. H.G.
0.44 55.7 Zm.5878.1.A1_at BU572163 hypothetical protein LOC100191954 - 6e-9 At1g76900 AtTLP1 (TUBBY LIKE PROTEIN 1) S.X. H.G.
0.38 44.2 Zm.17933.1.A1_at CF629311 hypothetical protein LOC100193370 - 2e+0 At4g27670 HSP21 (HEAT SHOCK PROTEIN 21) S.X. H.G.
0.33 36.0 Zm.4271.5.A1_x_at AI881217 hypothetical protein LOC100191665 - 2e+1 At3g55470 C2 domain-containing protein S.X. H.G.
0.30 29.8 Zm.13840.1.S1_at AY104083.1 - - 3e+0 At2g44360 unknown protein S.X. H.G.
0.15 8.6 Zm.3829.1.S1_at BM335816 - - 1e-15 At1g23310 GGT1 (GLUTAMATE:GLYOXYLATE AMINOTRANSFERASE) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.4 97.0 GSM205374 B73 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
5.3 96.9 GSM205366 B73 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
5.1 96.8 GSM205370 B73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.9 96.7 GSM205373 Mo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.9 96.7 GSM205376 B73xMo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.8 96.6 GSM202304 B73 immature ear tissue, biological replicate 3 GSE8176 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.7 96.5 GSM205369 Mo17 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.3 96.1 GSM205365 Mo17 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.3 96.1 GSM202297 Mo17 immature ear tissue, biological replicate 2 GSE8176 Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.2 96.0 GSM205372 B73xMo17 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.94 0 2958 Zm.10133.1.A1_a_at CD441295 ruBisCO large subunit-binding protein subunit beta - 2e-60 At1g55490 CPN60B (CHAPERONIN 60 BETA) C.G. S.X.
0.53 1e-137 490 Zm.3461.2.A1_a_at AI966852 RuBisCo subunit binding-protein beta subunit - 1e-55 At3g13470 chaperonin, putative C.G. S.X.
0.20 5e-115 414 Zm.10133.2.S1_at AI833460 - - 5e-1 At3g46870 pentatricopeptide (PPR) repeat-containing protein C.G. S.X.
0.15 3e-58 226 Zm.3461.1.A1_a_at BU197756 RuBisCo subunit binding-protein beta subunit - 1e-19 At3g13470 chaperonin, putative C.G. S.X.
0.15 3e-58 226 Zm.3461.1.A1_at BU197756 - - 1e-19 At3g13470 chaperonin, putative C.G. S.X.
0.01 1e-1 38 Zm.18726.1.A1_at BM075022 hypothetical protein LOC100272741 - 1e+0 At4g38060 unknown protein C.G. S.X.
0.01 5e-1 36 Zm.9702.1.S1_at BM336195 hypothetical protein LOC100273572 - 4e-7 At5g15790 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.01 5e-1 36 Zm.6139.2.A1_at CF018619 methionyl-tRNA synthetase - 1e-5 At2g40660 tRNA-binding region domain-containing protein C.G. S.X.
0.02 2e+0 34 Zm.89.1.A1_at L21006.1 mitochondrial chaperonin 60 - 1e-80 At3g23990 HSP60 (HEAT SHOCK PROTEIN 60) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.41 2e-60 234 Arabidopsis thaliana At1g55490 841996 CPN60B (CHAPERONIN 60 BETA) encodes the beta subunit of the chloroplast chaperonin 60, a homologue of bacterial GroEL. Mutants in this gene develops lesions on its leaves, expresses systemic acquired resistance (SAR) and develops accelerated cell death to heat shock stress. The protein has molecular chaperone activity for suppressing protein aggregation in vitro. - - - C.G. S.X.
0.15 6e-37 157 Glycine max Gma.5794.1.S1_a_at CD400361 - - 1e-84 At5g56500 ATP binding / protein binding C.G. S.X.
0.61 0 1249 Hordeum vulgare Contig7090_s_at Contig7090 - - 5e-40 At3g13470 chaperonin, putative C.G. S.X.
0.58 0 1320 Oryza sativa Os02g0102900 AK070603.1 - RuBisCO subunit binding-protein beta subunit (60kDa chaperonin beta subunit) (CPN-60 beta) (Fragment) 4e-53 At5g56500 ATP binding / protein binding C.G. S.X.
0.38 1e-65 252 Populus trichocarpa PtpAffx.15237.3.S1_at DN484013 hypothetical protein - 9e-74 At5g56500 ATP binding / protein binding C.G. S.X.
0.44 5e-83 309 Triticum aestivum Ta.9305.1.S1_at BJ283294 - - 5e-111 At1g55490 CPN60B (CHAPERONIN 60 BETA) C.G. S.X.
0.29 2e-42 173 Vitis vinifera 1609111_at CF207933 hypothetical protein LOC100263832 - 2e-93 At3g13470 chaperonin, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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