Gene omics information

Query gene ID	Zm.10103.1.A1_at
Gene name	hypothetical protein LOC100275728
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.77	92.1	Zm.10103.1.A1_at	AI947611	hypothetical protein LOC100275728	-	4e+0	At4g02370	unknown protein	S.X.	H.G.	Please select
0.57	75.1	Zm.6484.1.S1_at	AY103605.1	Ubiquitin carrier protein	-	1e-32	At3g46460	UBC13 (ubiquitin-conjugating enzyme 13)	S.X.	H.G.	Please select
0.49	61.9	Zm.5612.1.A1_at	AY106400.1	L-galactose dehydrogenase	-	7e-10	At4g33670	L-galactose dehydrogenase (L-GalDH)	S.X.	H.G.	Please select
0.44	55.7	Zm.18381.1.A1_at	CO523274	-	-	4e-1	At3g03720	CAT4 (CATIONIC AMINO ACID TRANSPORTER 4)	S.X.	H.G.	Please select
0.44	55.7	Zm.6532.9.S1_at	BF729207	hypothetical protein LOC100192494	-	2e-2	At1g18340	basal transcription factor complex subunit-related	S.X.	H.G.	Please select
0.44	55.7	Zm.18426.1.A1_at	CO529693	hypothetical protein LOC100274338	-	5e-8	At1g06890	transporter-related	S.X.	H.G.	Please select
0.42	51.3	Zm.10094.1.A1_at	BM379327	hypothetical protein LOC100278317	-	4e+0	At4g08455	BTB/POZ domain-containing protein	S.X.	H.G.	Please select
0.42	51.3	Zm.4529.2.S1_at	BM333157	-	-	8e+0	Atmg00050	-	S.X.	H.G.	Please select
0.39	45.6	Zm.1494.1.S1_at	AY105986.1	hypothetical protein LOC100279492	-	1e-2	At2g20825	ULT2 (ULTRAPETALA 2)	S.X.	H.G.	Please select
0.36	41.3	Zm.12352.1.S1_at	CF029529	-	-	1e+0	At1g78660	gamma-glutamyl hydrolase, putative / gamma-Glu-X carboxypeptidase, putative / conjugase, putative	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
73.5	100.0	GSM253281	ZM_8d_SG200_3Alu_II	GSE10023	Maize gene expression during infection with Ustilago maydis
67.0	100.0	GSM253282	ZM_8d_SG200_3Alu_III	GSE10023	Maize gene expression during infection with Ustilago maydis
44.1	100.0	GSM253280	ZM_8d_SG200_3Alu_I	GSE10023	Maize gene expression during infection with Ustilago maydis
6.0	97.3	GSM253279	ZM_8d_SG200_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
4.1	95.9	GSM253278	ZM_8d_SG200_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
3.2	94.5	GSM206304	Upper pulvinus 60 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
2.9	93.8	GSM253249	ZM_12h_SG200_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
2.3	91.7	GSM385709	Deep-sowing 10d treatment TIBA, biological rep1	GSE15371	Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
2.1	90.8	GSM323172	Zm_SG200Dpep1_24hpi_III	GSE12892	Maize gene expression during infection with Ustilago maydis strain SG200Dpep1
2.1	90.8	GSM206300	Upper pulvinus 2 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	5e-4	44	ZmAffx.1017.1.A1_at	AI881523	Hypothetical protein LOC100193713	-	3e+0	At3g25030	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.05	5e-4	44	ZmAffx.1017.1.S1_at	AI881523	Hypothetical protein LOC100193713	-	3e+0	At3g25030	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.03	1e-1	36	Zm.8846.1.A1_at	BM337343	-	-	4e+0	At3g29250	copper ion binding / oxidoreductase	C.G.	S.X.	Please select
0.02	1e-1	36	Zm.7006.2.A1_at	AW225324	hypothetical protein LOC100274348	-	5e-32	At5g35530	40S ribosomal protein S3 (RPS3C)	C.G.	S.X.	Please select
0.03	1e-1	36	Zm.1861.1.S1_at	CF009566	-	-	2e+0	At5g45040	cytochrome c6 (ATC6)	C.G.	S.X.	Please select
0.03	1e-1	36	Zm.17550.1.A1_at	CK368201	hypothetical protein LOC100275288	-	1e+0	At1g56450	PBG1	C.G.	S.X.	Please select
0.03	1e-1	36	Zm.12890.1.S1_at	CA401159	BES1/BZR1 protein	-	2e+0	At2g17420	NTRA (NADPH-DEPENDENT THIOREDOXIN REDUCTASE A)	C.G.	S.X.	Please select
0.04	5e-1	34	ZmAffx.1002.1.A1_at	AI881341	-	-	2e-1	At1g04445	zinc finger (C2H2 type) family protein	C.G.	S.X.	Please select
0.04	5e-1	34	ZmAffx.1002.1.S1_at	AI881341	hypothetical protein LOC100279402	-	2e-1	At1g04445	zinc finger (C2H2 type) family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	4e+0	32	Arabidopsis thaliana	At4g02370	828057	unknown protein	F:unknown;P:biological_process unknown;C:plasma membrane, vacuole;PO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	4e-1	36	Glycine max	PsAffx.CL2560Contig1_s_at	PsAffx.CL2560Contig1	-	-	4e-1	Atcg00140	-	C.G.	S.X.	Please select
0.03	1e-1	36	Hordeum vulgare	Contig2130_at	Contig2130	-	-	9e-66	At4g14320	60S ribosomal protein L36a/L44 (RPL36aB)	C.G.	S.X.	Please select
0.11	9e-3	42	Oryza sativa	OsAffx.3262.1.S1_s_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	6e+0	32	Populus trichocarpa	PtpAffx.208589.1.S1_at	pmrna17046	hypothetical protein	-	3e-1	At5g65640	bHLH093 (beta HLH protein 93)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	7e-2	38	Triticum aestivum	Ta.8740.3.S1_x_at	BJ248383	-	-	1e+0	At4g05030	heavy-metal-associated domain-containing protein	C.G.	S.X.	Please select
0.03	1e+0	32	Vitis vinifera	1621481_at	BQ798211	-	-	2e-1	At1g63820	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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