Gene omics information

Query gene ID TaAffx.99206.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5779.2TaAffx.99206.1.S1_atCA727631--3e-1At4g21610LOL2 (LSD ONE LIKE 2)S.X.H.G.
0.7188.0TaAffx.38217.1.S1_x_atBJ244494--7e+0At5g11690ATTIM17-3S.X.H.G.
0.5979.8Ta.11314.2.S1_x_atCA619157--4e+0At5g40500unknown proteinS.X.H.G.
0.5576.8Ta.5523.2.S1_a_atBJ243328--4e+0At5g47600heat shock protein-relatedS.X.H.G.
0.5273.7TaAffx.38815.1.A1_atBJ216899--1e+0At5g24170-S.X.H.G.
0.5072.4TaAffx.38217.1.S1_atBJ244494--7e+0At5g11690ATTIM17-3S.X.H.G.
0.4260.9TaAffx.78517.1.S1_atCA731451--4e+0At2g25720unknown proteinS.X.H.G.
0.4159.6TaAffx.113756.1.S1_atCA605644--1e-3At5g04250OTU-like cysteine protease family proteinS.X.H.G.
0.2735.6Ta.30411.1.S1_atCK209297--5e+0At5g62280unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
14.899.5GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
14.799.5GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
14.199.5GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.499.1GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.299.0GSM250908Tc_7dpi_inoculated_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.999.0GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
8.098.8GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.898.4GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
4.897.2GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
4.797.1GSM143506Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-136TaAffx.65404.1.S1_atBJ253832--3e-1At3g09700DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
0.023e-136TaAffx.129312.1.S1_atBJ209037--5e-7At5g16230acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putativeC.G.S.X.
0.033e-136TaAffx.120248.1.S1_atBJ234724--3e-1At5g40150peroxidase, putativeC.G.S.X.
0.033e-136TaAffx.120020.1.S1_atCA681344--1e+0At3g52060unknown proteinC.G.S.X.
0.033e-136TaAffx.119135.1.S1_x_atAJ615948--3e+0At5g26717-C.G.S.X.
0.033e-136TaAffx.119135.1.S1_atAJ615948--3e+0At5g26717-C.G.S.X.
0.033e-136Ta.27754.1.S1_x_atCD883562--2e-3At3g45960ATEXLA3 (arabidopsis thaliana expansin-like a3)C.G.S.X.
0.023e-136Ta.27754.2.S1_x_atBQ839103--1e-2At3g45960ATEXLA3 (arabidopsis thaliana expansin-like a3)C.G.S.X.
0.033e-136Ta.27754.1.S1_a_atCD883562--2e-3At3g45960ATEXLA3 (arabidopsis thaliana expansin-like a3)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e-136Arabidopsis thalianaAt4g21610828248LOL2 (LSD ONE LIKE 2)Contains the same novel zinc finger motif with LSD1, a negative regulator of cell death and defense response. Due to differential splicing, it encodes two different proteins, one of which contains an additional, putative DNA binding motif. Northern analysis demonstrated that LOL2 transcripts containing the additional DNA binding motif are predominantly upregulated after treatment with both virulent and avirulent Pseudomonas syringae pv maculicola strains.---C.G.S.X.
0.042e+034Glycine maxPsAffx.CL1720Contig1_s_atPsAffx.CL1720Contig1--1e-2At4g21610LOL2 (LSD ONE LIKE 2)C.G.S.X.
0.295e-146515Hordeum vulgareContig7849_atContig7849--7e-2At3g28200peroxidase, putativeC.G.S.X.
0.133e-21103Oryza sativaOs01g0207400AK109337.2-Hypothetical protein3e-1At4g36020CSDP1 (cold shock domain protein 1)C.G.S.X.
0.032e+034Populus trichocarpaPtpAffx.163434.1.S1_atCX175945hypothetical protein-5e-3At2g33510protein bindingC.G.S.X.
0.031e+032Vitis vinifera1621172_atCF516779--4e+0At5g52440HCF106C.G.S.X.
0.031e-136Zea maysZm.12317.1.S1_atAY106969.1ethylene-responsive transcription factor 4-2e-12At5g44210ERF9 (ERF DOMAIN PROTEIN 9)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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