Gene omics information

Query gene ID	TaAffx.99042.1.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	86.3	TaAffx.99042.1.A1_at	CK211682	-	-	1e+0	At1g75190	unknown protein	S.X.	H.G.	Please select
0.25	32.1	Ta.11011.1.S1_at	CA630168	-	-	1e+0	At4g32340	-	S.X.	H.G.	Please select
0.19	22.4	TaAffx.94674.1.S1_at	CA634230	-	-	4e+0	At4g33560	unknown protein	S.X.	H.G.	Please select
0.06	7.6	TaAffx.14996.1.S1_at	BE213403	-	-	7e+0	At3g47550	zinc finger (C3HC4-type RING finger) family protein	S.X.	H.G.	Please select
0.03	4.7	Ta.26034.1.A1_at	CD454830	-	-	5e+0	At1g64405	unknown protein	S.X.	H.G.	Please select
0.00	0.7	Ta.27482.1.S1_at	BJ265183	-	-	1e+0	At1g27710	glycine-rich protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
16.6	99.6	GSM314263	tissue type: seedling, crown - rep1	GSE12508	Transcription patterns during wheat development
16.6	99.6	GSM250916	TcLr1_7dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
16.3	99.6	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
16.0	99.6	GSM314267	tissue type: seedling, leaf - rep2	GSE12508	Transcription patterns during wheat development
15.8	99.6	GSM314268	tissue type: seedling, leaf - rep3	GSE12508	Transcription patterns during wheat development
14.1	99.5	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
12.3	99.4	GSM314251	tissue type: germinating seed, coleoptile - rep1	GSE12508	Transcription patterns during wheat development
11.9	99.4	GSM314264	tissue type: seedling, crown - rep2	GSE12508	Transcription patterns during wheat development
11.7	99.3	GSM314266	tissue type: seedling, leaf - rep1	GSE12508	Transcription patterns during wheat development
11.2	99.3	GSM246394	SB69_Stem_ rep1_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.37	3e-41	169	TaAffx.12159.1.S1_at	BJ286382	-	-	8e-2	At5g17050	UGT78D2 (UDP-GLUCOSYL TRANSFERASE 78D2)	C.G.	S.X.	Please select
0.23	4e-16	85	TaAffx.93119.1.A1_at	BJ230352	-	-	2e-2	At1g50470	-	C.G.	S.X.	Please select
0.08	4e-10	65	TaAffx.17044.1.S1_at	AL820408	-	-	9e+0	At2g23260	UGT84B1 (UDP-glucosyl transferase 84B1)	C.G.	S.X.	Please select
0.06	3e-7	56	TaAffx.93151.1.A1_at	BJ228434	-	-	4e-3	At4g36770	UDP-glycosyltransferase/ transferase, transferring glycosyl groups	C.G.	S.X.	Please select
0.13	1e-6	54	Ta.3188.1.S1_at	BJ224910	-	-	7e-2	At1g50470	-	C.G.	S.X.	Please select
0.06	2e-5	50	Ta.16772.1.S1_x_at	CA612266	-	-	3e-3	At4g15550	IAGLU (INDOLE-3-ACETATE BETA-D-GLUCOSYLTRANSFERASE)	C.G.	S.X.	Please select
0.06	2e-5	50	Ta.16772.1.S1_at	CA612266	-	-	3e-3	At4g15550	IAGLU (INDOLE-3-ACETATE BETA-D-GLUCOSYLTRANSFERASE)	C.G.	S.X.	Please select
0.06	9e-5	48	Ta.30327.2.A1_at	BJ239537	-	-	4e-3	At3g21750	UGT71B1 (UDP-GLUCOSYL TRANSFERASE 71B1)	C.G.	S.X.	Please select
0.10	9e-5	48	Ta.16527.1.S1_at	CA607907	-	-	7e-5	At2g43840	UDP-glucoronosyl/UDP-glucosyl transferase family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	1e+0	34	Arabidopsis thaliana	At1g75190	843856	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;MOFVPBA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	4e-1	36	Glycine max	GmaAffx.59500.3.S1_at	BG790368	-	-	2e+0	At5g57181	unknown protein	C.G.	S.X.	Please select
0.17	7e-13	73	Hordeum vulgare	HM05N21r_at	HM05N21r	-	-	1e+0	At2g17120	LYM2 (LYSM DOMAIN GPI-ANCHORED PROTEIN 2 PRECURSOR)	C.G.	S.X.	Please select
0.30	2e-34	147	Oryza sativa	OsAffx.11989.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	7e+0	32	Populus trichocarpa	PtpAffx.220689.1.S1_at	pmrna37099	-	-	4e+0	At1g64142	CPuORF23 (Conserved peptide upstream open reading frame 23)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	6e+0	30	Vitis vinifera	1616189_at	CF511570	hypothetical protein LOC100260741	-	6e-18	At1g75820	CLV1 (CLAVATA 1)	C.G.	S.X.	Please select
0.07	2e-3	42	Zea mays	Zm.1889.1.A1_at	CO520833	cytokinin-N-glucosyltransferase 1	-	1e-3	At3g55700	UDP-glucoronosyl/UDP-glucosyl transferase family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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