Gene omics information

Query gene ID TaAffx.97935.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7188.0TaAffx.97935.1.S1_atBQ801609--4e-4At1g20510OPCL1 (OPC-8:0 COA LIGASE1)S.X.H.G.
0.2532.1TaAffx.58767.1.S1_s_atCA616439--7e-5At2g43240nucleotide-sugar transmembrane transporter/ sugar:hydrogen symporterS.X.H.G.
0.078.6Ta.5224.1.S1_atBQ162436--1e-2At5g66250kinectin-relatedS.X.H.G.
0.078.6TaAffx.73632.1.A1_atBQ168793--1e+0At4g09010APX4 (ASCORBATE PEROXIDASE 4)S.X.H.G.
0.045.8Ta.27044.1.S1_atBJ263152--2e-1At1g67070DIN9 (DARK INDUCIBLE 9)S.X.H.G.
0.034.7TaAffx.38015.1.A1_atCA653610--2e+1At5g49015Expressed proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.098.0GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat development
5.597.8GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat development
5.497.7GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat development
4.296.6GSM138187genotype F38b developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.795.8GSM138152genotype G32 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.795.8GSM138153genotype G32 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.495.2GSM111187genotype B68 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
3.395.0GSM138177genotype A40 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.294.8GSM138211genotype B65 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.194.5GSM314280tissue type: anthers, before anthesis - rep3GSE12508Transcription patterns during wheat development
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.039e-238TaAffx.112141.1.S1_atCA626725--4e+0At3g58350meprin and TRAF homology domain-containing protein / MATH domain-containing proteinC.G.S.X.
0.036e+032TaAffx.6505.1.S1_atCA684453--1e+0At1g64460phosphatidylinositol 3- and 4-kinase family proteinC.G.S.X.
0.036e+032TaAffx.118865.1.S1_atBJ304807--4e+0At5g14680universal stress protein (USP) family proteinC.G.S.X.
0.026e+032Ta.4802.2.S1_atBJ279428--3e-11At5g64300ATGCHC.G.S.X.
0.036e+032Ta.2924.1.S1_atCF133597--1e+0At3g01850ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putativeC.G.S.X.
0.016e+032Ta.1868.1.S1_x_atCK160285actin-3e-108At2g37620ACT1 (ACTIN 1)C.G.S.X.
0.026e+032Ta.1868.2.A1_atCK159687Actin-2e-37At3g12110ACT11 (actin-11)C.G.S.X.
0.026e+032Ta.1868.2.A1_a_atCK159687actin-2e-37At3g12110ACT11 (actin-11)C.G.S.X.
0.026e+032Ta.1868.2.A1_x_atCK159687Actin-2e-37At3g12110ACT11 (actin-11)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.084e-446Arabidopsis thalianaAt1g20510838639OPCL1 (OPC-8:0 COA LIGASE1)F:4-coumarate-CoA ligase activity;P:phenylpropanoid metabolic process, jasmonic acid biosynthetic process, response to wounding;C:peroxisome;BOFMPAV---C.G.S.X.
0.208e-652Glycine maxGma.5038.3.S1_s_atAW830151--2e-9At5g633804-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinC.G.S.X.
0.502e-143508Hordeum vulgareContig16738_atContig16738--2e-3At1g20510OPCL1 (OPC-8:0 COA LIGASE1)C.G.S.X.
0.222e-62240Oryza sativaOsAffx.21790.1.S1_at---0C.G.S.X.
0.103e-550Populus trichocarpaPtpAffx.161822.1.A1_s_atCK0976804-coumarate-coa ligase-2e-9At1g204804-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinC.G.S.X.
0.122e-652Vitis vinifera1610552_atCF201894.1--5e-10At5g633804-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinC.G.S.X.
0.337e-56216Zea maysZm.777.1.S1_a_atCD442368hypothetical protein LOC100272376-4e-8At5g633804-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage