CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID TaAffx.97003.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 93.4 TaAffx.97003.1.S1_at CA709225 - - 3e-2 At2g39050 hydroxyproline-rich glycoprotein family protein S.X. H.G.
0.57 79.2 TaAffx.24913.1.S1_at CA710005 - - 9e-1 At1g52550 unknown protein S.X. H.G.
0.48 69.0 TaAffx.110697.1.S1_at CA679731 - - 4e+0 At1g47450 unknown protein S.X. H.G.
0.46 66.8 TaAffx.80801.1.S1_at CA692377 - - 9e+0 At1g02440 ATARFD1A (ADP-ribosylation factor D1A) S.X. H.G.
0.44 64.5 TaAffx.6386.1.S1_at CA686854 - - 2e+1 At4g14440 HCD1 (3-HYDROXYACYL-COA DEHYDRATASE 1) S.X. H.G.
0.43 62.2 TaAffx.26470.1.S1_at CA688638 - - 4e+0 At4g21610 LOL2 (LSD ONE LIKE 2) S.X. H.G.
0.43 62.2 TaAffx.23723.1.S1_at CA731348 - - 2e+1 At5g09445 unknown protein S.X. H.G.
0.43 62.2 TaAffx.105451.1.S1_at CA734135 - - 1e+0 At3g06730 thioredoxin family protein S.X. H.G.
0.43 62.2 TaAffx.107724.1.S1_at CA696363 - - 4e-2 At1g76180 ERD14 (EARLY RESPONSE TO DEHYDRATION 14) S.X. H.G.
0.41 59.6 Ta.5637.3.S1_at CA679041 - - 1e-3 At2g24940 AtMAPR2 (Arabidopsis thaliana membrane-associated progesterone binding protein 2) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
21.0 99.7 GSM250900 TcLr34_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
16.8 99.6 GSM250899 TcLr34_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
14.2 99.5 GSM250898 TcLr1_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
11.3 99.3 GSM250897 TcLr1_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.0 98.8 GSM250895 Tc_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.5 96.9 GSM250896 Tc_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.4 96.8 GSM324490 Si+ B- rep1 GSE12936 Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
4.2 96.6 GSM298085 Crown tissue of Solstice at 5 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
3.7 95.8 GSM138150 genotype H10 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.4 95.2 GSM298090 Leaf tissue of Solstice at 5 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 1e-1 36 TaAffx.73628.1.S1_at CA731309 - - 4e+0 At5g48350 nucleic acid binding C.G. S.X.
0.05 1e-1 36 TaAffx.38188.2.S1_at BJ245956 - - 4e+0 At5g26890 unknown protein C.G. S.X.
0.05 1e-1 36 Ta.17527.1.S1_at CA621519 - - 1e+0 At3g59650 mitochondrial ribosomal protein L51/S25/CI-B8 family protein C.G. S.X.
0.04 4e-1 34 TaAffx.77852.1.S1_at CA741779 - - 5e-6 At4g25820 XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9) C.G. S.X.
0.03 4e-1 34 Ta.6272.1.S1_a_at CK212873 - - 5e-1 At5g17950 unknown protein C.G. S.X.
0.03 4e-1 34 Ta.6272.1.S1_x_at CK212873 - - 5e-1 At5g17950 unknown protein C.G. S.X.
0.03 4e-1 34 Ta.13803.1.S1_x_at CA498188 - - 3e-2 At1g73630 calcium-binding protein, putative C.G. S.X.
0.03 4e-1 34 Ta.13803.1.S1_s_at CA498188 - - 3e-2 At1g73630 calcium-binding protein, putative C.G. S.X.
0.04 4e-1 34 Ta.13525.2.S1_at CA681487 - - 1e+0 At2g23040 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 3e-2 38 Arabidopsis thaliana At2g39050 818491 hydroxyproline-rich glycoprotein family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFOBV - - - C.G. S.X.
0.04 6e-1 34 Glycine max PsAffx.C61000026_at PsAffx.C61000026 - - 4e+0 At1g44750 ATPUP11 C.G. S.X.
0.19 7e-66 248 Hordeum vulgare Contig12560_at Contig12560 - - 2e-7 At4g13410 ATCSLA15 C.G. S.X.
0.12 1e-30 133 Oryza sativa Os07g0630900 AK122106.1 - CSLA7 (Fragment) 2e-8 At4g13410 ATCSLA15 C.G. S.X.
0.08 2e+0 32 Populus trichocarpa PtpAffx.61205.1.A1_at DN490079 - - 5e+0 At5g47700 60S acidic ribosomal protein P1 (RPP1C) C.G. S.X.
0.05 8e-3 38 Vitis vinifera 1621896_at CF604980 hypothetical protein LOC100265858 - 1e-9 At3g05100 - C.G. S.X.
0.04 3e-3 40 Zea mays Zm.17306.1.A1_at CK348204 - - 6e+0 At5g26890 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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