CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID TaAffx.95237.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.53 74.9 TaAffx.95237.1.S1_at BE430275 - - 3e-13 At1g76890 - S.X. H.G.
0.71 88.0 TaAffx.50801.1.S1_at CA608458 - - 1e+0 At2g41310 ATRR3 (RESPONSE REGULATOR 3) S.X. H.G.
0.55 76.8 Ta.11488.1.S1_x_at CK155265 - - 3e-24 At3g51550 FER (FERONIA) S.X. H.G.
0.48 69.0 Ta.14561.1.S1_at CA605612 - - 3e-1 At1g15885 unknown protein S.X. H.G.
0.44 64.5 Ta.11488.1.S1_s_at CK155265 - - 3e-24 At3g51550 FER (FERONIA) S.X. H.G.
0.40 58.4 Ta.1865.2.S1_x_at CK152141 - - 2e-2 At2g29125 RTFL2 (ROTUNDIFOLIA LIKE 2) S.X. H.G.
0.34 48.1 TaAffx.70539.1.A1_at BQ802325 - - 2e-12 At3g14230 RAP2.2 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
7.1 98.5 GSM314275 tissue type: pistil, before anthesis - rep1 GSE12508 Transcription patterns during wheat development
6.9 98.4 GSM314277 tissue type: pistil, before anthesis - rep3 GSE12508 Transcription patterns during wheat development
4.9 97.3 GSM314276 tissue type: pistil, before anthesis - rep2 GSE12508 Transcription patterns during wheat development
4.5 96.9 GSM111185 genotype C22 developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
4.2 96.6 GSM111186 genotype B68 developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
4.0 96.3 GSM111232 genotype H8 developing seed at 5 days after anthesis, biological rep1 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
3.7 95.8 GSM111225 genotype A81 developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
3.7 95.8 GSM111211 genotype B11 developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
3.6 95.6 GSM111197 genotype J15 developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
3.5 95.4 GSM111237 genotype F38b developing seed at 5 days after anthesis, biological rep2 GSE4935 wheat expression level polymorphism study 39 genotypes 2 biological reps
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.13 6e-70 266 TaAffx.20223.1.S1_at CD904934 - - 4e-6 At1g76880 trihelix DNA-binding protein, putative C.G. S.X.
0.01 4e-3 44 Ta.9542.1.S1_x_at BJ252470 - - 1e-3 At5g07070 CIPK2 (CBL-INTERACTING PROTEIN KINASE 2) C.G. S.X.
0.01 4e-3 44 Ta.905.2.S1_at BQ804326 avenin-like a precursor-like - 7e+0 At5g18400 unknown protein C.G. S.X.
0.01 4e-3 44 Ta.905.2.S1_x_at BQ804326 - - 7e+0 At5g18400 unknown protein C.G. S.X.
0.02 4e-3 44 Ta.21220.1.S1_x_at CK212224 - - 6e-3 At3g42310 unknown protein C.G. S.X.
0.02 2e-2 42 TaAffx.42864.3.S1_x_at CA734050 avenin-like a precursor-like - 3e-1 At2g37590 Dof-type zinc finger domain-containing protein C.G. S.X.
0.02 2e-2 42 TaAffx.42864.2.S1_at BQ607953 Avenin-like a precursor-like - 5e+0 At4g39040 RNA binding C.G. S.X.
0.01 7e-2 40 TaAffx.87062.1.S1_at CA596529 - - 1e+0 At3g50210 2-oxoacid-dependent oxidase, putative C.G. S.X.
0.01 7e-2 40 TaAffx.123398.1.S1_at CA713304 - - 4e+0 At1g30475 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 3e-13 77 Arabidopsis thaliana At1g76890 844024 - - - - - C.G. S.X.
0.08 8e-24 113 Glycine max Gma.8454.1.S1_at AF372498.1 GT-2 factor - 8e-16 At1g76880 trihelix DNA-binding protein, putative C.G. S.X.
0.84 0 981 Hordeum vulgare Contig8519_at Contig8519 - - 8e-14 At1g76880 trihelix DNA-binding protein, putative C.G. S.X.
0.26 1e-118 428 Oryza sativa Os10g0516500 AK059055.1 - Hypothetical protein 7e-4 At5g64905 PROPEP3 (Elicitor peptide 3 precursor) C.G. S.X.
0.06 1e-10 69 Populus trichocarpa PtpAffx.454.9.S1_at CK090038 hypothetical protein - 3e-21 At1g76880 trihelix DNA-binding protein, putative C.G. S.X.
0.03 2e-5 50 Vitis vinifera 1609798_at CB980206 hypothetical protein LOC100255432 - 7e-30 At5g28300 trihelix DNA-binding protein, putative C.G. S.X.
0.04 3e-5 50 Zea mays Zm.17917.1.A1_at CF629332 - - 6e+0 At4g13220 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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