CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID TaAffx.9482.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.2 TaAffx.9482.1.S1_at CA597312 - - 7e-2 At5g40250 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.83 93.4 TaAffx.70070.1.S1_at AJ610583 - - 6e+0 At5g12030 AT-HSP17.6A (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.6A) S.X. H.G.
0.83 93.4 Ta.16030.1.S1_at CA595441 - - 1e+1 At5g19370 rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing protein S.X. H.G.
0.83 93.4 TaAffx.110980.1.S1_at CA650450 - - 2e-1 At4g38840 auxin-responsive protein, putative S.X. H.G.
0.77 90.8 TaAffx.59721.1.S1_at CA596343 - - 1e+0 At2g45760 BAP2 (BON ASSOCIATION PROTEIN 2) S.X. H.G.
0.77 90.8 TaAffx.59706.1.S1_at CA596587 - - 4e+0 At1g75190 unknown protein S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
170.3 100.0 GSM139925 Anther tetrads rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
169.4 100.0 GSM139927 Anther tetrads rep3 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
9.9 99.1 GSM139922 Anther telophaseI-telophaseII rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.6 98.7 GSM139923 Anther telophaseI-telophaseII rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.0 97.4 GSM139924 Anther telophaseI-telophaseII rep3 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
1.6 86.1 GSM139928 Anther immature pollen rep1 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
0.8 71.2 GSM139930 Anther immature pollen rep3 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
0.5 61.1 GSM139926 Anther tetrads rep2 GSE6027 Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
0.3 52.1 GSM143505 Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
0.3 52.1 GSM143512 Thatcher_Lr34 (resistant), mock inoculated distal leaf, replication 2 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 5e-3 42 TaAffx.84061.1.S1_at CA645676 - - 4e+0 At3g24506 unknown protein C.G. S.X.
0.03 7e-2 38 TaAffx.88904.1.S1_x_at BE515367 - - 1e+0 At4g00460 Rho guanyl-nucleotide exchange factor C.G. S.X.
0.04 7e-2 38 TaAffx.79623.1.S1_at CA711702 - - 4e+0 At1g78172 unknown protein C.G. S.X.
0.03 7e-2 38 TaAffx.65594.1.S1_at BJ236677 - - 1e+0 At5g43410 ethylene-responsive factor, putative C.G. S.X.
0.05 7e-2 38 TaAffx.52845.1.S1_at CA699901 - - 1e+1 At4g30670 unknown protein C.G. S.X.
0.04 7e-2 38 TaAffx.132337.2.S1_at CA633931 - - 4e+0 At4g10880 unknown protein C.G. S.X.
0.04 7e-2 38 TaAffx.132337.1.S1_at CK213301 - - 5e+0 At1g71030 MYBL2 (ARABIDOPSIS MYB-LIKE 2) C.G. S.X.
0.04 7e-2 38 TaAffx.12879.1.A1_at BJ220189 - - 1e+0 At5g28630 glycine-rich protein C.G. S.X.
0.04 7e-2 38 TaAffx.111892.2.S1_at CA635642 - - 4e+0 At5g66110 metal ion binding C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 7e-2 38 Arabidopsis thaliana At5g40250 834023 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFV - - - C.G. S.X.
0.06 2e-3 44 Glycine max GmaAffx.61437.1.A1_at CD401808 - - 2e-1 At5g58020 unknown protein C.G. S.X.
0.05 5e-4 44 Hordeum vulgare Contig8550_s_at Contig8550 - - 9e-1 At3g48660 unknown protein C.G. S.X.
0.30 6e-47 188 Oryza sativa Os09g0309600 AK106857.1 - Conserved hypothetical protein 2e-3 At3g61230 LIM domain-containing protein C.G. S.X.
0.05 2e-2 40 Populus trichocarpa PtpAffx.5122.6.A1_at CV272959 hypothetical protein - 7e-5 At5g24510 60s acidic ribosomal protein P1, putative C.G. S.X.
0.04 3e-1 34 Vitis vinifera 1622474_at CF373640 - - 3e+0 At1g54445 - C.G. S.X.
0.19 2e-9 61 Zea mays Zm.12511.1.S1_at AW062063 hypothetical protein LOC100276976 - 5e+0 At5g53110 - C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage