Gene omics information

Query gene ID	TaAffx.94033.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.87	94.2	TaAffx.94033.1.S1_at	CK162983	-	-	3e-7	At3g23640	HGL1 (heteroglycan glucosidase 1)	S.X.	H.G.	Please select
0.48	69.0	TaAffx.109197.1.S1_s_at	CA693819	-	-	5e+0	At3g04390	xanthine dehydrogenase family protein	S.X.	H.G.	Please select
0.47	67.9	Ta.853.2.S1_at	BG909044	-	-	8e-1	At4g07675	unknown protein	S.X.	H.G.	Please select
0.45	65.2	TaAffx.119544.1.S1_at	BJ268733	-	-	4e-20	At5g20350	TIP1 (TIP GROWTH DEFECTIVE 1)	S.X.	H.G.	Please select
0.41	59.6	Ta.27926.2.S1_at	BJ301489	-	-	2e-7	At1g54490	XRN4 (EXORIBONUCLEASE 4)	S.X.	H.G.	Please select
0.39	56.1	TaAffx.41970.1.S1_s_at	BJ223549	-	-	5e+0	At2g24880	self-incompatibility protein-related	S.X.	H.G.	Please select
0.34	48.1	TaAffx.106359.1.S1_at	CA655213	-	-	3e-1	At4g16780	ATHB-2 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2)	S.X.	H.G.	Please select
0.33	46.9	TaAffx.94429.2.S1_s_at	CA678627	-	-	4e+0	At4g33985	unknown protein	S.X.	H.G.	Please select
0.31	42.7	TaAffx.13369.1.S1_at	BG905284	-	-	1e-21	At4g32180	ATPANK2 (PANTOTHENATE KINASE 2)	S.X.	H.G.	Please select
0.31	42.7	TaAffx.4780.1.S1_at	CA732154	-	-	8e-17	At3g14270	phosphatidylinositol-4-phosphate 5-kinase family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
13.0	99.4	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
12.5	99.4	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
12.3	99.4	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
12.0	99.4	GSM111185	genotype C22 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
10.4	99.2	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
8.2	98.8	GSM343687	Wheat var. Kennedy_Fp inoculated_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
7.4	98.6	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.1	98.5	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.9	98.4	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
6.7	98.4	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	3e-1	36	TaAffx.102809.1.S1_at	CK161865	-	-	2e-16	At1g63050	membrane bound O-acyl transferase (MBOAT) family protein	C.G.	S.X.	Please select
0.03	3e-1	36	Ta.21120.1.S1_at	CA744576	-	-	1e+0	At1g09460	glucan endo-1,3-beta-glucosidase-related	C.G.	S.X.	Please select
0.02	1e+0	34	TaAffx.693.1.S1_at	CD492128	-	-	2e-3	At3g12650	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.59184.1.S1_at	CA606639	-	-	1e+0	At5g35520	MIS12 (MINICHROMOSOME INSTABILITY 12 (MIS12)-LIKE)	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.120209.1.S1_at	BJ236482	-	-	3e-1	At2g38210	PDX1L4 (PUTATIVE PDX1-LIKE PROTEIN 4)	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.112769.1.S1_at	CA621113	-	-	4e+0	At3g01280	VDAC1 (VOLTAGE DEPENDENT ANION CHANNEL 1)	C.G.	S.X.	Please select
0.01	1e+0	34	Ta.5255.1.S1_at	BT008937.1	drought-responsive factor-like transcription factor DRFL1a	-	4e-3	At1g22190	AP2 domain-containing transcription factor, putative	C.G.	S.X.	Please select
0.02	5e+0	32	TaAffx.72734.1.S1_at	CD876173	-	-	5e-1	At2g03520	ATUPS4 (Arabidopsis thaliana ureide permease 4)	C.G.	S.X.	Please select
0.03	5e+0	32	TaAffx.23027.1.S1_at	CA741620	-	-	4e+0	At5g39260	ATEXPA21 (ARABIDOPSIS THALIANA EXPANSIN A21)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	3e-7	56	Arabidopsis thaliana	At3g23640	821944	HGL1 (heteroglycan glucosidase 1)	F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:chloroplast;BMFOPA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e+0	34	Glycine max	Gma.12173.1.S1_at	BI424426	-	-	3e-3	At1g60960	IRT3	C.G.	S.X.	Please select
0.03	2e+0	32	Hordeum vulgare	Contig25403_at	Contig25403	-	-	4e+0	At2g21060	ATGRP2B (GLYCINE-RICH PROTEIN 2B)	C.G.	S.X.	Please select
Os07g0420700	0.20	3e-95	Oryza sativa	Os02g0274100	AF442962.1	-	3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8)	2e-9	At4g29010	AIM1 (ABNORMAL INFLORESCENCE MERISTEM)	C.G.	S.X.	Please select
0.04	5e-10	65	Populus trichocarpa	PtpAffx.220115.1.S1_at	pmrna36450	hypothetical protein	-	7e-89	At3g23640	HGL1 (heteroglycan glucosidase 1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	6e+0	30	Vitis vinifera	1614689_at	CF511280	hypothetical protein LOC100240753	-	5e-6	At2g36200	kinesin motor protein-related	C.G.	S.X.	Please select
0.03	8e+0	30	Zea mays	ZmAffx.31.1.S1_at	AI657417	-	-	8e-1	At3g55880	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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