Gene omics information

Query gene ID	TaAffx.93289.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	86.3	TaAffx.93289.1.S1_at	BJ224797	-	-	7e-2	At5g18460	unknown protein	S.X.	H.G.	Please select
0.29	39.2	Ta.18714.2.S1_at	BJ267788	-	-	4e+0	At5g01790	unknown protein	S.X.	H.G.	Please select
0.27	35.6	Ta.6939.2.S1_at	BJ312772	-	-	7e+0	At4g30510	AtATG18b	S.X.	H.G.	Please select
0.19	22.4	Ta.9523.3.S1_s_at	CA616260	-	-	7e-2	At5g03580	polyadenylate-binding protein, putative / PABP, putative	S.X.	H.G.	Please select
0.16	18.2	TaAffx.57258.1.S1_at	CA633608	-	-	2e+0	Atmg00560	-	S.X.	H.G.	Please select
0.12	13.3	TaAffx.111365.1.S1_at	CA642217	-	-	4e+0	At3g57900	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
15.4	99.6	GSM111237	genotype F38b developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
6.0	98.0	GSM111236	genotype F38b developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
5.5	97.8	GSM111185	genotype C22 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
5.5	97.8	GSM111228	genotype B65 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
5.4	97.7	GSM111193	genotype F38a developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
5.2	97.5	GSM111229	genotype B65 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
5.0	97.4	GSM111194	genotype C25 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.8	97.2	GSM138200	genotype F48 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.8	97.2	GSM138150	genotype H10 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.3	96.7	GSM111145	genotype RL4452 developing seed at 5 days after anthesis, biological rep1	GSE4929	wheat expression level polymorphism study parental genotypes 2 biological reps

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.15	9e-17	87	Ta.7595.1.A1_at	BJ261301	-	-	5e-4	At3g13510	unknown protein	C.G.	S.X.	Please select
0.06	8e-14	77	Ta.30520.1.S1_at	CA635767	-	-	8e-20	At1g55360	unknown protein	C.G.	S.X.	Please select
0.11	3e-13	75	Ta.5845.1.S1_x_at	CK153266	-	-	3e-13	At3g13510	unknown protein	C.G.	S.X.	Please select
0.11	3e-13	75	Ta.5845.1.S1_at	CK153266	-	-	3e-13	At3g13510	unknown protein	C.G.	S.X.	Please select
0.06	1e-3	44	TaAffx.113652.1.S1_at	CA607485	-	-	1e+0	At5g56530	unknown protein	C.G.	S.X.	Please select
0.04	7e-2	38	Ta.3244.1.S1_at	BJ209125	-	-	9e-1	At2g11005	glycine-rich protein	C.G.	S.X.	Please select
0.04	3e-1	36	TaAffx.112271.1.S1_at	CA625388	-	-	4e+0	At3g63060	EDL3 (EID1-like 3)	C.G.	S.X.	Please select
0.03	3e-1	36	TaAffx.107510.1.S1_at	CA698707	-	-	1e-1	At4g37210	tetratricopeptide repeat (TPR)-containing protein	C.G.	S.X.	Please select
0.03	3e-1	36	Ta.4156.2.S1_at	BJ259919	-	-	3e-7	At5g47140	zinc finger (GATA type) family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	7e-2	38	Arabidopsis thaliana	At5g18460	831964	unknown protein	F:unknown;P:biological_process unknown;C:endomembrane system;PFB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.07	2e-2	40	Glycine max	Gma.2172.2.S1_a_at	BI426425	-	-	1e-145	At1g55360	unknown protein	C.G.	S.X.	Please select
0.14	3e-18	91	Hordeum vulgare	Contig5275_at	Contig5275	-	-	3e-22	At3g13510	unknown protein	C.G.	S.X.	Please select
0.44	3e-98	359	Oryza sativa	Os05g0169800	9633.m00693	-	Protein of unknown function DUF239 domaincontaining protein	2e-6	At5g50150	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	2e+1	30	Populus trichocarpa	PtpAffx.98539.1.S1_s_at	CK106582	hypothetical protein	-	2e-1	At5g22000	RHF2A (RING-H2 GROUP F2A)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	5e+0	30	Vitis vinifera	1616482_at	CF210444	hypothetical protein LOC100250510	-	2e-1	At1g55475	unknown protein	C.G.	S.X.	Please select
0.58	1e-158	557	Zea mays	Zm.18964.1.S1_at	CO533873	hypothetical protein LOC100194165	-	8e+0	At4g33560	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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