Gene omics information

Query gene ID	TaAffx.9313.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	TaAffx.9313.1.S1_at	CA603357	-	-	1e-3	At4g08330	unknown protein	S.X.	H.G.	Please select
0.07	8.6	TaAffx.112772.1.S1_at	CA621091	-	-	2e+1	At4g18280	glycine-rich cell wall protein-related	S.X.	H.G.	Please select
0.07	8.6	TaAffx.4898.1.S1_at	CA729097	-	-	4e+0	At2g01530	MLP329 (MLP-LIKE PROTEIN 329)	S.X.	H.G.	Please select
0.04	5.8	Ta.5523.2.S1_a_at	BJ243328	-	-	4e+0	At5g47600	heat shock protein-related	S.X.	H.G.	Please select
0.04	5.8	TaAffx.23723.1.S1_at	CA731348	-	-	2e+1	At5g09445	unknown protein	S.X.	H.G.	Please select
0.02	3.6	TaAffx.115939.2.S1_at	CA677586	-	-	7e-2	At1g30800	-	S.X.	H.G.	Please select

Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
20.0	99.7	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
18.8	99.7	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
11.6	99.3	GSM250908	Tc_7dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
10.8	99.2	GSM250902	Tc_7dpi_inoculated_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.3	99.0	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.7	98.7	GSM138207	genotype B11 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
7.5	98.6	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.3	98.6	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.8	98.4	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.3	98.2	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars

Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	4e-4	44	TaAffx.82096.1.S1_at	CA677607	-	-	7e+0	At5g06660	unknown protein	C.G.	S.X.	Please select
0.06	5e-3	40	TaAffx.57062.1.S1_at	CA637478	-	-	2e-2	At1g36380	unknown protein	C.G.	S.X.	Please select
0.07	2e-2	38	TaAffx.8038.1.S1_at	CA638484	-	-	1e+1	At5g57370	unknown protein	C.G.	S.X.	Please select
0.07	2e-2	38	TaAffx.52006.1.S1_at	CA714803	-	-	3e+0	At1g01305	unknown protein	C.G.	S.X.	Please select
0.09	2e-2	38	TaAffx.24874.1.S1_at	CA710703	-	-	7e+0	At3g09940	MDHAR (MONODEHYDROASCORBATE REDUCTASE)	C.G.	S.X.	Please select
0.07	2e-2	38	TaAffx.107821.1.S1_at	CA694866	-	-	4e-3	At1g25472	CPuORF54 (Conserved peptide upstream open reading frame 54)	C.G.	S.X.	Please select
0.04	2e-2	38	Ta.24639.2.S1_at	CK195573	-	-	3e+1	At5g43910	pfkB-type carbohydrate kinase family protein	C.G.	S.X.	Please select
0.04	2e-2	38	Ta.24639.2.S1_x_at	CK195573	-	-	3e+1	At5g43910	pfkB-type carbohydrate kinase family protein	C.G.	S.X.	Please select
0.05	2e-2	38	Ta.24639.1.S1_a_at	CK199553	-	-	2e-3	At5g47090	unknown protein	C.G.	S.X.	Please select

Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.08	1e-3	42	Arabidopsis thaliana	At4g08330	826387	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.06	3e-2	38	Glycine max	GmaAffx.85045.1.S1_at	AW734632	-	-	2e-1	At5g26720	unknown protein	C.G.	S.X.	Please select
0.13	6e-4	42	Hordeum vulgare	HF21N04r_at	HF21N04r	-	-	2e+0	At4g19150	ankyrin repeat family protein	C.G.	S.X.	Please select
0.10	3e-3	42	Oryza sativa	Os02g0282700	9630.m01710	-	-	2e-3	At3g57950	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.07	7e-3	40	Populus trichocarpa	PtpAffx.200402.1.S1_at	pmrna805	hypothetical protein	-	8e-2	At1g64490	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.07	4e-4	42	Vitis vinifera	1621823_at	CF214240	hypothetical protein LOC100253216	-	4e+0	At5g66000	unknown protein	C.G.	S.X.	Please select
0.08	1e-1	34	Zea mays	ZmAffx.783.1.S1_at	AI745854	-	-	8e-7	At1g51730	RWD domain-containing protein	C.G.	S.X.	Please select

Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage