CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID TaAffx.91903.1.A1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.73 89.1 TaAffx.91903.1.A1_at BJ294119 - - 6e-2 At4g13770 CYP83A1 (CYTOCHROME P450 83A1) S.X. H.G.
0.35 49.8 TaAffx.114090.1.S1_at CA598892 - - 4e+0 At5g28310 oxidoreductase-related S.X. H.G.
0.33 46.9 Ta.3867.3.S1_x_at CA604296 - - 4e-3 At4g26850 VTC2 (vitamin c defective 2) S.X. H.G.
0.29 39.2 Ta.14740.1.S1_at CA681282 - - 5e+0 At4g38860 auxin-responsive protein, putative S.X. H.G.
0.27 35.6 Ta.3867.3.S1_a_at CA604296 - - 4e-3 At4g26850 VTC2 (vitamin c defective 2) S.X. H.G.
0.26 33.6 Ta.3867.1.S1_at CA653984 - - 4e-28 At4g26850 VTC2 (vitamin c defective 2) S.X. H.G.
0.26 33.6 Ta.28103.1.S1_s_at CA613215 - - 3e-1 At4g26850 VTC2 (vitamin c defective 2) S.X. H.G.
0.25 32.1 Ta.3853.2.S1_at BJ248397 - - 4e-1 At5g27730 unknown protein S.X. H.G.
0.20 24.0 Ta.18362.1.A1_at AJ612031 - - 6e+0 At5g38420 ribulose bisphosphate carboxylase small chain 2B / RuBisCO small subunit 2B (RBCS-2B) (ATS2B) S.X. H.G.
0.19 22.4 Ta.5633.2.S1_at BG904409 - - 5e+0 At1g17235 RTFL11 (ROTUNDIFOLIA LIKE 11) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
94.1 100.0 GSM298065 Leaf tissue of Paragon at 3 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
35.1 99.9 GSM143495 Jupateco_Lr34 (resistant), mock inoculated distal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
23.7 99.8 GSM143498 Jupateco_Lr34 (susceptible), mock inoculated basal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
21.0 99.7 GSM143501 Jupateco_Lr34 (susceptible), mock inoculated distal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
11.9 99.4 GSM324484 Si- B- rep1 GSE12936 Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
10.1 99.2 GSM143492 Jupateco_Lr34 (resistant), mock inoculated basal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
10.0 99.1 GSM143494 Jupateco_Lr34 (resistant), mock inoculated distal leaf, replication 2 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
10.0 99.1 GSM314266 tissue type: seedling, leaf - rep1 GSE12508 Transcription patterns during wheat development
7.7 98.7 GSM314278 tissue type: anthers, before anthesis - rep1 GSE12508 Transcription patterns during wheat development
6.9 98.4 GSM143499 Jupateco_Lr34 (susceptible), mock inoculated distal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.48 4e-37 155 Ta.12113.1.S1_at BQ171624 - - 1e-3 At4g13770 CYP83A1 (CYTOCHROME P450 83A1) C.G. S.X.
0.36 3e-13 75 Ta.1506.2.A1_at CA710529 - - 1e-2 At3g48280 CYP71A25 C.G. S.X.
0.36 3e-13 75 Ta.1506.2.A1_x_at CA710529 - - 1e-2 At3g48280 CYP71A25 C.G. S.X.
0.20 2e-11 69 Ta.1506.1.A1_a_at BE430555 - - 1e-5 At1g13090 CYP71B28 C.G. S.X.
0.18 2e-11 69 Ta.1506.1.A1_x_at BE430555 - - 1e-5 At1g13090 CYP71B28 C.G. S.X.
0.05 4e-6 52 TaAffx.107656.1.S1_at CA696987 - - 4e+0 At4g00124 unknown protein C.G. S.X.
0.04 2e-5 50 Ta.24779.1.S1_at BM135608 - - 3e+0 At3g60961 ATP binding / nucleobase, nucleoside, nucleotide kinase C.G. S.X.
0.11 7e-5 48 TaAffx.86019.1.S1_at CA617557 - - 1e-2 At3g20100 CYP705A19 C.G. S.X.
0.06 1e-3 44 TaAffx.58749.1.S1_at CA616570 - - 3e+0 At3g29170 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 6e-2 38 Arabidopsis thaliana At4g13770 827011 CYP83A1 (CYTOCHROME P450 83A1) Encodes a cytochrome p450 enzyme that catalyzes the initial conversion of aldoximes to thiohydroximates in the synthesis of glucosinolates not derived from tryptophan. Also has a role in auxin homeostasis. - - - C.G. S.X.
0.08 9e-5 48 Glycine max Gma.8401.1.A1_at BU547972 - - 3e-1 At3g26170 CYP71B19 C.G. S.X.
0.41 1e-63 242 Hordeum vulgare Contig12521_at Contig12521 - - 4e-2 At4g15330 CYP705A1 C.G. S.X.
0.19 1e-13 77 Oryza sativa Os.24882.1.S1_s_at - - - 0 C.G. S.X.
0.04 2e-2 40 Populus trichocarpa PtpAffx.224593.1.S1_at pmrna43271 cytochrome P450 - 6e-1 At1g03470 kinase interacting family protein C.G. S.X.
0.04 1e+0 32 Vitis vinifera 1614070_at CF214262 hypothetical protein LOC100247788 - 4e-3 At3g14630 CYP72A9 C.G. S.X.
0.07 7e-9 59 Zea mays Zm.14226.1.A1_at BM337251 hypothetical protein LOC100273457 - 3e-2 At3g20100 CYP705A19 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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