Gene omics information

Query gene ID	TaAffx.91458.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	TaAffx.91458.1.S1_at	BJ317403	-	-	1e+0	At5g09500	40S ribosomal protein S15 (RPS15C)	S.X.	H.G.	Please select
0.36	51.9	Ta.19265.1.S1_at	CA649365	-	-	1e+0	At2g16070	PDV2 (PLASTID DIVISION2)	S.X.	H.G.	Please select
0.22	27.1	Ta.22398.1.S1_at	CA597140	-	-	8e+0	At5g20100	unknown protein	S.X.	H.G.	Please select
0.10	11.3	TaAffx.19604.1.A1_at	BJ309279	-	-	3e-1	At5g47090	unknown protein	S.X.	H.G.	Please select
0.07	8.6	TaAffx.1833.1.S1_at	BJ239476	-	-	5e-1	At4g37409	unknown protein	S.X.	H.G.	Please select
0.05	6.7	TaAffx.39988.1.A1_at	BJ275531	-	-	4e+0	At5g52740	heavy-metal-associated domain-containing protein	S.X.	H.G.	Please select

Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
10.2	99.2	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
7.8	98.7	GSM250918	TcLr34_7dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.7	98.7	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
7.1	98.5	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.6	98.3	GSM250915	TcLr1_7dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.5	98.3	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.0	98.0	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.6	97.8	GSM250883	Tc_3dpi_mock_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.4	97.7	GSM324493	Si+ B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
5.1	97.5	GSM250913	Tc_7dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	2e-2	40	TaAffx.105632.1.S1_at	CA731711	-	-	1e-2	At4g36780	transcription regulator	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.79831.1.S1_at	CA707854	-	-	2e-1	At1g79790	haloacid dehalogenase-like hydrolase family protein	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.58999.1.S1_at	CA610228	-	-	3e-1	At3g17780	unknown protein	C.G.	S.X.	Please select
0.02	1e+0	34	TaAffx.38429.1.S1_at	BJ238520	-	-	2e-7	At3g06200	guanylate kinase, putative	C.G.	S.X.	Please select
0.04	1e+0	34	TaAffx.24118.2.S1_at	CA724793	-	-	7e-1	At2g23320	WRKY15	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.105657.1.S1_at	CA731458	-	-	1e+0	At5g55570	unknown protein	C.G.	S.X.	Please select
0.02	1e+0	34	Ta.4075.1.S1_s_at	BT009078.1	-	-	4e-11	At3g53340	NF-YB10 (NUCLEAR FACTOR Y, SUBUNIT B10)	C.G.	S.X.	Please select
0.02	1e+0	34	Ta.4075.1.S1_at	BT009078.1	-	-	4e-11	At3g53340	NF-YB10 (NUCLEAR FACTOR Y, SUBUNIT B10)	C.G.	S.X.	Please select
0.02	1e+0	34	Ta.237.1.S1_a_at	AF002211.1	glutathione-S-transferase	-	7e+0	At5g09995	unknown protein	C.G.	S.X.	Please select

Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e+0	34	Arabidopsis thaliana	At5g09500	830809	40S ribosomal protein S15 (RPS15C)	F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit;BOPMAF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	2e+0	34	Glycine max	GmaAffx.75176.1.S1_at	BF070694	-	-	2e-20	At3g49470	NACA2 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2)	C.G.	S.X.	Please select
0.03	2e+0	32	Hordeum vulgare	HVSMEk0022L04r2_s_at	HVSMEk0022L04r2	-	-	9e-1	At2g28800	ALB3 (ALBINO 3)	C.G.	S.X.	Please select
0.04	9e-3	42	Oryza sativa	OsAffx.14218.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	4e-1	36	Populus trichocarpa	PtpAffx.223777.1.S1_at	pmrna41947	-	-	2e-4	At1g75550	glycine-rich protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	3e-1	34	Vitis vinifera	1616806_at	CF605749	hypothetical protein LOC100259004	-	6e-2	At2g01340	unknown protein	C.G.	S.X.	Please select
0.03	2e+0	32	Zea mays	Zm.6369.3.A1_at	AI881634	Putative zinc finger protein30	-	5e-5	At3g15680	zinc finger (Ran-binding) family protein	C.G.	S.X.	Please select

Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage