Gene omics information

Query gene ID	TaAffx.8802.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	TaAffx.8802.1.S1_at	CA620016	-	-	4e+0	At5g04760	myb family transcription factor	S.X.	H.G.	Please select
0.36	51.9	TaAffx.13285.1.S1_at	BG910034	-	-	3e+0	At5g62210	embryo-specific protein-related	S.X.	H.G.	Please select
0.17	19.8	TaAffx.38268.1.A1_at	BJ242361	-	-	1e+0	At1g21326	VQ motif-containing protein	S.X.	H.G.	Please select
0.16	18.2	TaAffx.64591.1.S1_at	BJ288225	-	-	1e+0	At1g19010	unknown protein	S.X.	H.G.	Please select
0.08	9.4	Ta.6893.1.A1_at	BQ807133	-	-	4e-1	At4g31800	WRKY18	S.X.	H.G.	Please select
0.05	6.7	Ta.3203.2.S1_x_at	CA621738	-	-	5e-6	At1g27530	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
15.4	99.6	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
8.1	98.8	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.9	98.4	GSM298054	Leaf tissue of Harnesk at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
6.8	98.4	GSM298079	Leaf tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.4	98.2	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
6.0	98.0	GSM111174	genotype G30 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
5.5	97.8	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.0	97.4	GSM298053	Leaf tissue of Harnesk at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.8	97.2	GSM143517	Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.7	97.1	GSM250908	Tc_7dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.35	4e-102	371	TaAffx.128616.2.S1_s_at	CK166801	-	-	3e-9	At4g15940	fumarylacetoacetate hydrolase family protein	C.G.	S.X.	Please select
0.04	1e-6	54	TaAffx.128616.1.S1_x_at	CD924685	-	-	1e-1	At3g16700	fumarylacetoacetate hydrolase family protein	C.G.	S.X.	Please select
0.03	1e-3	44	TaAffx.105714.1.S1_at	CA660111	-	-	2e+0	At5g15960	KIN1	C.G.	S.X.	Please select
0.04	2e-2	40	TaAffx.110632.1.S1_at	CA656838	-	-	4e+0	At2g16580	auxin-responsive protein, putative	C.G.	S.X.	Please select
0.05	2e-2	40	Ta.5506.2.S1_at	CA726734	-	-	3e+0	At1g53625	unknown protein	C.G.	S.X.	Please select
0.05	2e-2	40	Ta.5506.2.S1_x_at	CA726734	-	-	3e+0	At1g53625	unknown protein	C.G.	S.X.	Please select
0.04	3e-1	36	TaAffx.59917.1.S1_at	CA593582	-	-	2e-1	At4g13720	inosine triphosphate pyrophosphatase, putative / HAM1 family protein	C.G.	S.X.	Please select
0.04	3e-1	36	TaAffx.51464.1.S1_at	CA724117	-	-	1e+1	At1g59970	matrixin family protein	C.G.	S.X.	Please select
0.03	3e-1	36	TaAffx.117173.1.S1_at	BQ608944	-	-	2e+1	At5g55135	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	4e+0	32	Arabidopsis thaliana	At5g04760	830354	myb family transcription factor	F:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;POMF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	1e-1	38	Glycine max	PsAffx.C19000111_at	PsAffx.C19000111	-	-	1e+0	At4g38670	pathogenesis-related thaumatin family protein	C.G.	S.X.	Please select
0.38	7e-93	339	Hordeum vulgare	Contig8875_at	Contig8875	-	-	1e-4	At4g15940	fumarylacetoacetate hydrolase family protein	C.G.	S.X.	Please select
0.40	2e-71	270	Oryza sativa	OsAffx.3375.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	6e+0	32	Populus trichocarpa	PtpAffx.211390.1.S1_at	pmrna22324	hypothetical protein	-	7e-2	At4g39470	chloroplast lumen common family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	1e+0	32	Vitis vinifera	1622818_x_at	CF204959.1	-	-	2e+1	At5g64541	unknown protein	C.G.	S.X.	Please select
0.55	0	737	Zea mays	Zm.5579.1.A1_at	CF630296	fumarylacetoacetate hydrolase domain-containing protein 1	-	1e-1	At3g16700	fumarylacetoacetate hydrolase family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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