Gene omics information

Query gene ID	TaAffx.86192.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	TaAffx.86192.1.S1_at	CA614702	-	-	1e+0	At1g01130	unknown protein	S.X.	H.G.	Please select
0.50	72.4	TaAffx.58638.1.S1_at	CA617698	-	-	4e+0	At1g12805	nucleotide binding	S.X.	H.G.	Please select
0.50	72.4	TaAffx.4913.1.S1_at	CA728728	-	-	2e+1	At5g67060	HEC1 (HECATE 1)	S.X.	H.G.	Please select
0.32	44.4	TaAffx.112158.1.S1_at	CA626538	-	-	2e+1	At3g28590	unknown protein	S.X.	H.G.	Please select
0.29	39.2	TaAffx.81752.1.S1_at	CA682283	-	-	4e+0	At3g06600	unknown protein	S.X.	H.G.	Please select
0.27	35.6	TaAffx.78861.1.S1_at	CA725589	-	-	1e+1	At3g28070	nodulin MtN21 family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
14.9	99.5	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
10.0	99.1	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.7	98.9	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
6.9	98.4	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.7	97.9	GSM298066	Leaf tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.2	97.5	GSM298056	Leaf tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.9	97.3	GSM298063	Crown tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.3	96.7	GSM138162	genotype E5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.2	96.6	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.2	96.6	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.29	7e-45	180	Ta.5200.1.A1_at	BJ285227	-	-	3e-5	At4g19680	IRT2	C.G.	S.X.	Please select
0.02	4e-3	42	TaAffx.12194.1.S1_at	BJ282316	-	-	4e+0	At5g41980	unknown protein	C.G.	S.X.	Please select
0.02	7e-2	38	TaAffx.106421.1.S1_at	CD933478	zinc transporter ZIP	-	3e+0	At5g62160	AtZIP12 (ZINC TRANSPORTER 12 PRECURSOR)	C.G.	S.X.	Please select
0.02	7e-2	38	Ta.8859.1.S1_at	BQ162524	-	-	2e-1	At4g39950	CYP79B2	C.G.	S.X.	Please select
0.03	3e-1	36	TaAffx.85574.1.S1_at	CA621513	-	-	7e-2	At1g02405	proline-rich family protein	C.G.	S.X.	Please select
0.04	3e-1	36	TaAffx.51464.1.S1_at	CA724117	-	-	1e+1	At1g59970	matrixin family protein	C.G.	S.X.	Please select
0.01	3e-1	36	Ta.24515.1.S1_at	AF005993.1	HSP70	-	9e-122	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.90338.1.S1_at	BQ578385	-	-	6e+0	At5g67510	60S ribosomal protein L26 (RPL26B)	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.84616.1.S1_at	CA632976	-	-	3e-1	At1g63105	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	1e+0	34	Arabidopsis thaliana	At1g01130	839359	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	4e-1	36	Glycine max	PsAffx.CL1928Contig1_s_at	PsAffx.CL1928Contig1	-	-	2e+0	At4g18620	-	C.G.	S.X.	Please select
0.06	2e-6	52	Hordeum vulgare	Contig16352_at	Contig16352	-	-	3e-1	At4g19850	ATPP2-A2	C.G.	S.X.	Please select
0.07	1e-7	57	Oryza sativa	Os05g0472600	9633.m03682	-	Conserved hypothetical protein	2e-6	At4g19680	IRT2	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	4e-1	36	Populus trichocarpa	Ptp.3677.2.S1_a_at	CA820849	hypothetical protein	-	6e-111	Atcg00905	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	3e-1	34	Vitis vinifera	1610295_at	BQ797947	hypothetical protein LOC100259329	-	8e-5	At2g25090	CIPK16 (CBL-INTERACTING PROTEIN KINASE 16)	C.G.	S.X.	Please select
0.03	3e-2	38	Zea mays	Zm.5776.1.A1_at	CO520963	hypothetical protein LOC100273913	-	9e-2	At2g47140	short-chain dehydrogenase/reductase (SDR) family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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