Gene omics information

Query gene ID TaAffx.85247.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.2TaAffx.85247.1.S1_atCA624417--4e+0At3g15640cytochrome c oxidase family proteinS.X.H.G.
0.1011.3TaAffx.51397.1.S1_atCA725473--4e-49At1g23490ATARF1 (ADP-RIBOSYLATION FACTOR 1)S.X.H.G.
0.078.6TaAffx.120617.1.S1_atBJ212756--4e+0At2g39470PPL2 (PsbP-like protein 2)S.X.H.G.
0.056.7TaAffx.120295.1.S1_atBJ232977--2e+1At5g42504unknown proteinS.X.H.G.
0.034.7TaAffx.79532.1.S1_atCA713411--3e+1At4g02360unknown proteinS.X.H.G.
0.034.7TaAffx.128414.149.S1_atCA664567--9e-94Atcg00490-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
45.499.9GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
26.499.8GSM298069Leaf tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
19.799.7GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
18.199.7GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
17.499.6GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
15.399.6GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
4.496.8GSM143504Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.296.6GSM298065Leaf tissue of Paragon at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
3.896.0GSM143512Thatcher_Lr34 (resistant), mock inoculated distal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.595.4GSM111220genotype H23 developing seed at 5 days after anthesis, biological rep1GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.468e-51200TaAffx.31243.1.S1_atCA618220--4e+0At4g20325unknown proteinC.G.S.X.
0.041e-344TaAffx.106082.1.S1_x_atCA725012--3e-1At1g07220-C.G.S.X.
0.041e-344TaAffx.106082.1.S1_atCA725012--3e-1At1g07220-C.G.S.X.
0.042e-240TaAffx.30814.1.S1_atCA621861--1e+0At2g36930zinc finger (C2H2 type) family proteinC.G.S.X.
0.042e-240TaAffx.112355.1.S1_atCA618883--4e+0At2g17080unknown proteinC.G.S.X.
0.042e-240TaAffx.112355.2.S1_s_atCA623393--2e-2At3g0963060S ribosomal protein L4/L1 (RPL4A)C.G.S.X.
0.022e-240Ta.28708.1.S1_atBJ228966--3e-18At3g46460UBC13 (ubiquitin-conjugating enzyme 13)C.G.S.X.
0.037e-238TaAffx.85793.2.S1_atCA620910--4e+0At3g15640cytochrome c oxidase family proteinC.G.S.X.
0.023e-136TaAffx.94076.1.S1_atCA729082--7e+0At5g13850NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.034e+032Arabidopsis thalianaAt3g15640820806cytochrome c oxidase family proteinF:cytochrome-c oxidase activity, metal ion binding;P:unknown;C:mitochondrial envelope, mitochondrion, chloroplast thylakoid membrane;MFPO---C.G.S.X.
0.032e+034Glycine maxGmaAffx.87924.1.S1_atAW596893--9e-39At3g05000transport protein particle (TRAPP) component Bet3 family proteinC.G.S.X.
0.041e-136Hordeum vulgareAF474373_CDS-2_atAF474373_CDS-2--3e-1At1g52905unknown proteinC.G.S.X.
0.129e-961Oryza sativaOs02g0130000AK106464.1-SWIb domain-containing protein (Fragment)4e-1At1g29480unknown proteinC.G.S.X.
0.036e+032Populus trichocarpaPtpAffx.225658.1.S1_s_atpmrna45158hypothetical protein-6e-11At1g14550anionic peroxidase, putativeC.G.S.X.
0.035e+030Vitis vinifera1618898_atCF568799--7e-5At4g14500-C.G.S.X.
0.553e-113406Zea maysZm.5875.1.A1_atCA402986hypothetical protein LOC100193662-7e+0At3g15640cytochrome c oxidase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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