CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID TaAffx.84937.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.2 TaAffx.84937.1.S1_at BJ286240 - - 1e-1 At1g69790 protein kinase, putative S.X. H.G.
0.67 86.3 Ta.4747.1.S1_at BJ270962 - - 2e-2 At5g28630 glycine-rich protein S.X. H.G.
0.67 86.3 Ta.4747.1.S1_x_at BJ270962 - - 2e-2 At5g28630 glycine-rich protein S.X. H.G.
0.63 83.1 Ta.13988.1.S1_at BE415640 - - 5e+0 At5g28750 thylakoid assembly protein, putative S.X. H.G.
0.61 82.0 Ta.13164.1.S1_at BQ171469 - - 4e-2 At5g08790 ATAF2 S.X. H.G.
0.57 79.2 Ta.4747.2.S1_x_at CA618635 - - 9e-1 At5g23420 HMGB6 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
66.8 100.0 GSM143521 Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
45.1 99.9 GSM143523 Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
41.7 99.9 GSM314267 tissue type: seedling, leaf - rep2 GSE12508 Transcription patterns during wheat development
25.2 99.8 GSM143508 Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
23.7 99.8 GSM143524 Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
23.2 99.8 GSM143525 Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 2 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
19.4 99.7 GSM143492 Jupateco_Lr34 (resistant), mock inoculated basal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
15.3 99.6 GSM314261 tissue type: seedling, root - rep2 GSE12508 Transcription patterns during wheat development
13.5 99.5 GSM143511 Thatcher_Lr34 (resistant), mock inoculated distal leaf, replication 1 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
8.7 98.9 GSM143510 Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e-5 50 Ta.7511.1.S1_at CA652130 - - 2e-10 At1g79620 leucine-rich repeat transmembrane protein kinase, putative C.G. S.X.
0.05 3e-5 50 Ta.30723.1.S1_at CA667557 - - 3e-4 At1g48210 serine/threonine protein kinase, putative C.G. S.X.
0.05 5e-4 46 TaAffx.26787.1.S1_at CA684955 - - 4e-3 At1g48210 serine/threonine protein kinase, putative C.G. S.X.
0.03 5e-4 46 Ta.7017.1.S1_at BJ280811 - - 1e-2 At2g48010 RKF3 (RECEPTOR-LIKE KINASE IN IN FLOWERS 3) C.G. S.X.
0.04 2e-3 44 TaAffx.84014.1.S1_at CA646297 - - 7e-2 At5g47070 protein kinase, putative C.G. S.X.
0.04 2e-3 44 TaAffx.24943.1.S1_at CA709529 - - 9e-7 At3g08680 leucine-rich repeat transmembrane protein kinase, putative C.G. S.X.
0.03 2e-3 44 Ta.25419.1.S1_a_at CD490505 - - 4e-4 At5g02070 protein kinase-related C.G. S.X.
0.04 2e-3 44 Ta.12685.1.S1_at CA722001 - - 1e-1 At2g28930 APK1B C.G. S.X.
0.04 2e-3 44 Ta.12685.1.S1_x_at CA722001 - - 1e-1 At2g28930 APK1B C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 1e-1 38 Arabidopsis thaliana At1g69790 843315 protein kinase, putative F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;MPOBFVA - - - C.G. S.X.
0.09 1e-1 38 Glycine max GmaAffx.89406.1.A1_at CK606424 - - 3e-8 At5g56460 protein kinase, putative C.G. S.X.
0.08 4e-12 71 Hordeum vulgare Contig15156_at Contig15156 - - 2e+0 At1g48210 serine/threonine protein kinase, putative C.G. S.X.
0.15 7e-20 99 Oryza sativa Os08g0457400 AK106955.1 - Protein kinase APK1B (EC 2.7.1.-) 2e-5 At3g55450 protein kinase, putative C.G. S.X.
0.04 4e-2 40 Populus trichocarpa PtpAffx.136078.1.A1_at CK089933 hypothetical protein - 1e-9 At1g07570 APK1A C.G. S.X.
0.04 8e-3 40 Vitis vinifera 1616189_at CF511570 hypothetical protein LOC100260741 - 6e-18 At1g75820 CLV1 (CLAVATA 1) C.G. S.X.
0.07 1e-11 69 Zea mays Zm.9130.1.A1_at BM268570 - - 7e-2 At3g62220 serine/threonine protein kinase, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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