Gene omics information

Query gene ID	TaAffx.84729.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.44	64.5	TaAffx.84729.1.S1_at	CA630325	-	-	3e-1	At1g10210	ATMPK1 (MITOGEN-ACTIVATED PROTEIN KINASE 1)	S.X.	H.G.	Please select
0.40	58.4	Ta.8433.2.S1_a_at	CA645972	-	-	1e-3	At2g06050	OPR3 (OPDA-REDUCTASE 3)	S.X.	H.G.	Please select
0.29	39.2	Ta.3932.1.S1_a_at	CA685040	-	-	2e+1	At5g23510	unknown protein	S.X.	H.G.	Please select
0.27	35.6	Ta.8631.2.S1_a_at	CA635564	-	-	5e-9	At3g49870	ATARLA1C (ADP-ribosylation factor-like A1C)	S.X.	H.G.	Please select
0.23	29.0	Ta.29714.2.S1_at	CA608421	-	-	4e+0	At4g32580	thioredoxin family protein	S.X.	H.G.	Please select
0.17	19.8	Ta.8488.1.S1_a_at	CA637893	-	-	4e+0	At4g12040	zinc finger (AN1-like) family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
14.7	99.5	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
11.1	99.3	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
9.8	99.1	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
9.1	99.0	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
8.8	98.9	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
8.7	98.9	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
8.2	98.8	GSM314272	tissue type: floral bracts, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
8.0	98.8	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
7.9	98.7	GSM343687	Wheat var. Kennedy_Fp inoculated_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
7.7	98.7	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e+0	34	Ta.28487.2.S1_a_at	BJ220768	-	-	1e-3	At1g18640	-	C.G.	S.X.	Please select
0.03	1e+0	34	Ta.28487.2.S1_x_at	BJ220768	-	-	1e-3	At1g18640	-	C.G.	S.X.	Please select
0.02	1e+0	34	Ta.28487.1.S1_at	CD932862	-	-	1e-8	At1g18640	-	C.G.	S.X.	Please select
0.04	5e+0	32	Ta.21962.1.S1_at	CA712162	-	-	6e+0	At5g15460	MUB2 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 2)	C.G.	S.X.	Please select
0.02	2e+1	30	TaAffx.92707.2.S1_at	BJ239127	-	-	5e+0	At5g35760	beta-galactosidase	C.G.	S.X.	Please select
0.03	2e+1	30	TaAffx.8885.1.S1_at	CA618589	-	-	7e-8	At5g40150	peroxidase, putative	C.G.	S.X.	Please select
0.03	2e+1	30	TaAffx.86667.1.S1_at	CA603223	-	-	2e-2	At3g56510	TBP-binding protein, putative	C.G.	S.X.	Please select
0.03	2e+1	30	TaAffx.32427.1.S1_at	CA595200	-	-	3e+0	At1g77770	protein binding / zinc ion binding	C.G.	S.X.	Please select
0.03	2e+1	30	TaAffx.12125.1.S1_at	BJ290101	-	-	7e-8	At4g31160	DCAF1 (DDB1-CUL4 ASSOCIATED FACTOR 1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	3e-1	36	Arabidopsis thaliana	At1g10210	837559	ATMPK1 (MITOGEN-ACTIVATED PROTEIN KINASE 1)	Encodes ATMPK1.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	6e+0	32	Glycine max	GmaAffx.78712.1.S1_at	BQ742553	-	-	2e+0	At2g41120	unknown protein	C.G.	S.X.	Please select
0.40	3e-144	510	Hordeum vulgare	Contig9812_at	Contig9812	-	-	5e-11	At2g25530	AFG1-like ATPase family protein	C.G.	S.X.	Please select
0.26	4e-57	222	Oryza sativa	Os03g0851900	AK059105.1	-	Conserved hypothetical protein	8e-14	At2g25530	AFG1-like ATPase family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	4e-1	36	Populus trichocarpa	Ptp.1437.2.S1_at	CV228759	-	-	9e-2	At3g11730	ATFP8	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	3e-1	34	Vitis vinifera	1609522_at	CF213650	hypothetical LOC100254143	-	2e-1	At3g17500	F-box family protein	C.G.	S.X.	Please select
0.03	7e+0	30	Zea mays	ZmAffx.126.1.A1_at	AI665940	-	-	3e+0	At5g14910	heavy-metal-associated domain-containing protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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