CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID TaAffx.84352.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 93.4 TaAffx.84352.1.S1_at CA638782 - - 5e-43 At3g61650 TUBG1 (GAMMA-TUBULIN) S.X. H.G.
0.73 89.1 Ta.11895.1.S1_at BQ171007 - - 4e-6 At1g25280 AtTLP10 (TUBBY LIKE PROTEIN 10) S.X. H.G.
0.63 83.1 Ta.4932.3.S1_x_at BJ319726 - - 4e-28 At5g22330 RIN1 (RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1) S.X. H.G.
0.57 79.2 Ta.9770.1.S1_at BJ230730 - - 6e+0 At5g19940 plastid-lipid associated protein PAP-related / fibrillin-related S.X. H.G.
0.55 76.8 TaAffx.98307.1.S1_at CA649031 - - 7e-2 At4g36950 MAPKKK21 S.X. H.G.
0.47 67.9 Ta.4932.1.A1_a_at BJ274109 - - 8e-2 At1g12890 AP2 domain-containing transcription factor, putative S.X. H.G.
0.38 54.7 Ta.22929.1.S1_at CA702369 - - 8e-2 At5g27740 EMB2775 (EMBRYO DEFECTIVE 2775) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
7.9 98.7 GSM314269 tissue type: immature inflorescence - rep1 GSE12508 Transcription patterns during wheat development
7.5 98.6 GSM298092 Crown tissue of Solstice at 3 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
7.3 98.6 GSM298087 Crown tissue of Solstice at 9 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
6.5 98.3 GSM314270 tissue type: immature inflorescence - rep2 GSE12508 Transcription patterns during wheat development
5.9 98.0 GSM298062 Crown tissue of Harnesk at 5 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
5.6 97.8 GSM298073 Crown tissue of Paragon at 5 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
5.4 97.7 GSM298061 Crown tissue of Harnesk at 5 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
5.3 97.6 GSM298076 Crown tissue of Paragon at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
5.3 97.6 GSM298088 Crown tissue of Solstice at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
5.1 97.5 GSM298083 Crown tissue of Solstice at 3 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.27 6e-55 214 Ta.18924.1.A1_x_at BQ168748 - - 8e-8 At3g61650 TUBG1 (GAMMA-TUBULIN) C.G. S.X.
0.27 6e-55 214 Ta.18924.1.A1_at BQ168748 - - 8e-8 At3g61650 TUBG1 (GAMMA-TUBULIN) C.G. S.X.
0.10 6e-18 91 TaAffx.79850.1.S1_at CA707458 - - 3e-38 At5g05620 GCP2 (GAMMA-TUBULIN COMPLEX PROTEIN 2) C.G. S.X.
0.02 1e+0 34 Ta.27497.1.S1_at BQ168747 - - 1e-14 At5g47730 SEC14 cytosolic factor, putative / polyphosphoinositide-binding protein, putative C.G. S.X.
0.03 4e+0 32 TaAffx.26279.1.S1_at CA690408 - - 1e+0 At3g15358 unknown protein C.G. S.X.
0.01 4e+0 32 TaAffx.10512.1.S1_at CD871845 - - 2e-7 At1g78180 binding C.G. S.X.
0.02 4e+0 32 Ta.9667.1.S1_at BJ230772 - - 6e-7 At5g19910 SOH1 family protein C.G. S.X.
0.03 4e+0 32 Ta.3008.2.S1_at BJ242407 - - 2e-11 At1g52600 signal peptidase, putative C.G. S.X.
0.03 4e+0 32 Ta.28454.1.S1_at CF134182 - - 9e-2 At1g20700 WOX14 (WUSCHEL RELATED HOMEOBOX 14) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.28 5e-43 174 Arabidopsis thaliana At3g61650 825338 TUBG1 (GAMMA-TUBULIN) Required for centrosomal and noncentrosomal microtubule nucleation. Involved in specification of cell identity, such as stomatal patterning. Constitutively expressed throughout plant. - - - C.G. S.X.
0.41 2e-21 103 Glycine max GmaAffx.15181.1.S1_at BU548362 - - 4e-87 At3g61650 TUBG1 (GAMMA-TUBULIN) C.G. S.X.
0.39 0 829 Hordeum vulgare Contig12366_at Contig12366 - - 9e-134 At5g05620 GCP2 (GAMMA-TUBULIN COMPLEX PROTEIN 2) C.G. S.X.
0.30 1e-149 529 Oryza sativa Os05g0156600 AK102557.1 - Tubulin gamma-1 chain (Gamma-1 tubulin) 4e-154 At3g61650 TUBG1 (GAMMA-TUBULIN) C.G. S.X.
0.31 2e-61 236 Populus trichocarpa PtpAffx.202249.1.S1_s_at pmrna4506 tubulin gamma-1 chain, at3g61650-like protein /// tubulin gamma-2 chain - 0 At5g05620 GCP2 (GAMMA-TUBULIN COMPLEX PROTEIN 2) C.G. S.X.
0.05 1e+0 32 Vitis vinifera 1612591_at CB973056 - - 4e+0 At5g57230 - C.G. S.X.
0.35 2e-133 474 Zea mays Zm.5789.5.S1_a_at X80375.1 gamma-tubulin 1 - 9e-155 At3g61650 TUBG1 (GAMMA-TUBULIN) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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