Gene omics information

Query gene ID TaAffx.8388.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.2TaAffx.8388.1.S1_atCA626252--7e-2At5g15960KIN1S.X.H.G.
0.1922.4TaAffx.78517.1.S1_atCA731451--4e+0At2g25720unknown proteinS.X.H.G.
0.1719.8TaAffx.80668.1.S1_atCA694164--1e+0At5g4770060S acidic ribosomal protein P1 (RPP1C)S.X.H.G.
0.1719.8TaAffx.113756.1.S1_atCA605644--1e-3At5g04250OTU-like cysteine protease family proteinS.X.H.G.
0.1719.8TaAffx.24685.1.S1_atCA714323--3e+0At2g36080DNA-binding protein, putativeS.X.H.G.
0.089.4TaAffx.77881.1.S1_atCA741326--2e+1Atcg00065-S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
15.799.6GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
15.699.6GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
14.199.5GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
12.799.4GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
11.899.3GSM143525Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
8.598.9GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
6.998.4GSM143510Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.298.1GSM246384SB165_Stem_ rep1_at anthesisGSE9767Genotypic differences in water soluble carbohydrate metabolism in stem
6.198.1GSM143495Jupateco_Lr34 (resistant), mock inoculated distal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.198.1GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.239e-2097Ta.3118.1.S1_atBE515437--5e-4At1g27140ATGSTU14 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 14)C.G.S.X.
0.132e-1169Ta.3118.2.S1_atCA642191--4e+0At1g78460SOUL heme-binding family proteinC.G.S.X.
0.104e-342TaAffx.113716.1.S1_atCA606450--2e-1At5g38960germin-like protein, putativeC.G.S.X.
0.033e-136TaAffx.104181.1.S1_atCA728303--4e-3At5g5025031 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, putative / RNA-binding protein cp31, putativeC.G.S.X.
0.033e-136Ta.24106.1.S1_x_atCA665159peroxidase-1e+0At3g32980peroxidase 32 (PER32) (P32) (PRXR3)C.G.S.X.
0.021e+034TaAffx.50902.1.S1_atCA698725--5e-1At5g28490LSH1 (LIGHT-DEPENDENT SHORT HYPOCOTYLS 1)C.G.S.X.
0.031e+034TaAffx.37239.1.S1_s_atBJ297869--6e+0At3g44140unknown proteinC.G.S.X.
0.031e+034TaAffx.37239.1.S1_atBJ297869--6e+0At3g44140unknown proteinC.G.S.X.
0.011e+034Ta.442.1.S1_atD86327.1catalase-1e-27At4g35090CAT2 (CATALASE 2)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.057e-238Arabidopsis thalianaAt5g15960831453KIN1cold and ABA inducible protein kin1, possibly functions as an anti-freeze protein. Transcript level of this gene is induced by cold, ABA, dehydration and osmoticum (mannitol). However, protein activity of GUS fused to the promoter of this gene is inhibited by cold treatment, suggesting an inhibition of the protein by increased transcript level.---C.G.S.X.
0.039e-238Glycine maxPsAffx.CL577Contig1_atPsAffx.CL577Contig1--2e-2At5g15960KIN1C.G.S.X.
0.239e-1579Hordeum vulgareContig6008_s_atContig6008--5e-4At1g27140ATGSTU14 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 14)C.G.S.X.
0.209e-961Oryza sativaOs.46637.1.S1_at---0C.G.S.X.
0.046e+032Populus trichocarpaPtpAffx.110108.1.A1_atCK091363--1e+1At5g45980WOX8 (WUSCHEL RELATED HOMEOBOX 8)C.G.S.X.
0.035e+030Vitis vinifera1621880_s_atCK138206.1hypothetical protein LOC100262668-3e+0At5g14360ubiquitin family proteinC.G.S.X.
0.6501001Zea maysZm.556.2.A1_a_atBM380003glutathione transferase31-6e-4At5g62480ATGSTU9 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 9)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage