Gene omics information

Query gene ID	TaAffx.83715.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.71	88.0	TaAffx.83715.1.S1_at	CA653254	-	-	2e+1	At5g50740	metal ion binding	S.X.	H.G.	Please select
0.40	58.4	TaAffx.82014.1.S1_at	CA678857	-	-	1e+0	At1g45063	copper ion binding / electron carrier	S.X.	H.G.	Please select
0.40	58.4	Ta.26652.1.A1_at	CD491481	-	-	1e-3	At1g36050	unknown protein	S.X.	H.G.	Please select
0.36	51.9	TaAffx.61664.1.S1_at	CA629036	-	-	2e-1	At1g59171	ATP binding / inositol pentakisphosphate 2-kinase	S.X.	H.G.	Please select
0.35	49.8	TaAffx.84919.1.S1_at	CA627238	-	-	2e+1	At5g39920	-	S.X.	H.G.	Please select
0.19	22.4	TaAffx.83840.1.S1_at	CA649783	-	-	4e+0	At1g28170	sulfotransferase family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
15.7	99.6	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
14.1	99.5	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
13.8	99.5	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
10.6	99.2	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
10.3	99.2	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
9.0	99.0	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.0	99.0	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.3	98.2	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
6.3	98.2	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.8	97.9	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.16	5e-15	81	TaAffx.27764.1.S1_at	CA671002	-	-	4e+0	At4g09720	Ras-related GTP-binding protein, putative	C.G.	S.X.	Please select
0.16	1e-6	54	TaAffx.5984.1.S1_at	CA693908	-	-	1e+0	At1g05030	hexose transporter, putative	C.G.	S.X.	Please select
0.08	1e-3	44	Ta.25002.1.A1_at	CB412209	-	-	1e+0	At5g61710	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.59400.1.S1_at	CA601153	-	-	4e+0	At4g13660	PRR2 (PINORESINOL REDUCTASE 2)	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.33515.2.A1_x_at	CD926752	-	-	3e-1	At3g52380	CP33	C.G.	S.X.	Please select
0.01	1e+0	34	Ta.12529.1.S1_at	CK211211	-	-	4e+0	At4g14880	OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1)	C.G.	S.X.	Please select
0.01	1e+0	34	Ta.12529.1.S1_x_at	CK211211	-	-	4e+0	At4g14880	OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1)	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.23159.2.S1_at	CA737956	-	-	3e+0	At5g14140	zinc finger (C2H2 type) family protein	C.G.	S.X.	Please select
0.02	4e+0	32	TaAffx.23159.1.S1_at	CA611858	-	-	4e-1	At2g34260	transducin family protein / WD-40 repeat family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e+1	30	Arabidopsis thaliana	At5g50740	835146	metal ion binding	F:metal ion binding;P:metal ion transport;C:cellular_component unknown;POMBFV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e-1	38	Glycine max	GmaAffx.33044.1.S1_s_at	BQ297845	-	-	1e-2	At4g30662	unknown protein	C.G.	S.X.	Please select
0.03	2e+0	32	Hordeum vulgare	Contig11133_at	Contig11133	-	-	4e-1	At4g29480	mitochondrial ATP synthase g subunit family protein	C.G.	S.X.	Please select
0.03	2e+0	34	Oryza sativa	Os09g0259366	9637.m00619	-	-	6e+0	At5g60400	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	6e+0	32	Populus trichocarpa	PtpAffx.71540.1.A1_at	CK090779	hypothetical protein	-	6e-1	At2g22670	IAA8	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	3e-1	34	Vitis vinifera	1611468_at	CD798881	hypothetical protein LOC100261882	-	6e+0	At4g25810	XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)	C.G.	S.X.	Please select
0.07	2e-3	42	Zea mays	ZmAffx.909.1.A1_at	AI770947	-	-	3e+0	At2g37060	NF-YB8 (NUCLEAR FACTOR Y, SUBUNIT B8)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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