Gene omics information

Query gene ID TaAffx.83397.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.2TaAffx.83397.1.S1_atCA658049--9e+0At4g24805methyltransferaseS.X.H.G.
0.8393.4TaAffx.78678.1.S1_atCA729105--4e+0At1g66820glycine-rich proteinS.X.H.G.
0.6182.0Ta.10630.2.A1_atCA696219--4e-3At3g06750hydroxyproline-rich glycoprotein family proteinS.X.H.G.
0.5979.8Ta.9718.2.S1_atCA737941--2e-31At1g29910CAB3 (CHLOROPHYLL A/B BINDING PROTEIN 3)S.X.H.G.
0.5979.8TaAffx.128506.3.A1_atCA678081--8e-14At1g29920CAB2 (CHLOROPHYLL A/B-BINDING PROTEIN 2)S.X.H.G.
0.5879.2TaAffx.26876.1.S1_atCA683776--4e+0At3g25580thioredoxin-relatedS.X.H.G.
0.5779.2TaAffx.128712.19.S1_s_atCA672849Photosystem II CP43 chlorophyll apoprotein-2e+0At4g09649unknown proteinS.X.H.G.
0.5779.2Ta.9718.2.S1_x_atCA737941--2e-31At1g29910CAB3 (CHLOROPHYLL A/B BINDING PROTEIN 3)S.X.H.G.
0.5173.0Ta.5109.3.S1_atCA697843Plasma membrane H+-ATPase subunit H-9e-6At4g26710ATP synthase subunit H family proteinS.X.H.G.
0.5072.4Ta.30727.1.A1_atCK211113--1e-39At5g01530chlorophyll A-B binding protein CP29 (LHCB4)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
313.4100.0GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription survey
3.395.0GSM298056Leaf tissue of Harnesk at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
2.692.9GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
2.391.5GSM298053Leaf tissue of Harnesk at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
2.190.3GSM298068Leaf tissue of Paragon at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
2.089.7GSM111147genotype RL4452 developing seed at 5 days after anthesis, biological rep2GSE4929wheat expression level polymorphism study parental genotypes 2 biological reps
1.888.1GSM298066Leaf tissue of Paragon at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
1.888.1GSM298055Leaf tissue of Harnesk at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
1.787.1GSM298089Leaf tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
1.686.1GSM298057Leaf tissue of Harnesk at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.036e-134Ta.28224.1.S1_x_atCK193135--2e+0At5g67490unknown proteinC.G.S.X.
0.036e-134Ta.28224.2.S1_x_atBQ172227--2e+0At1g59171ATP binding / inositol pentakisphosphate 2-kinaseC.G.S.X.
0.041e+130TaAffx.81798.1.S1_atCA681730--4e+0At4g00220JLO (JAGGED LATERAL ORGANS)C.G.S.X.
0.031e+130TaAffx.59709.1.S1_atCA596557--2e+1At4g36780transcription regulatorC.G.S.X.
0.041e+130TaAffx.30076.1.S1_atCA629155--4e+0At5g17090-C.G.S.X.
0.031e+130Ta.11912.1.S1_atBQ171052--2e+0At3g55646unknown proteinC.G.S.X.
0.031e+130Ta.1111.2.S1_a_atCK211977--7e-12At1g76300SmD3 (snRNP core protein SmD3)C.G.S.X.
0.031e+130Ta.1111.2.S1_x_atCK211977--7e-12At1g76300SmD3 (snRNP core protein SmD3)C.G.S.X.
0.031e+130Ta.1111.3.S1_atBJ295064--3e-8At1g20580small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.039e+030Arabidopsis thalianaAt4g24805828583methyltransferaseF:methyltransferase activity;P:metabolic process;C:endomembrane system;POBAF---C.G.S.X.
0.058e-134Glycine maxGma.4613.3.S1_a_atCD396567--3e-5At1g67740PSBYC.G.S.X.
0.272e-24111Hordeum vulgareHVSMEm0015O15f_s_atHVSMEm0015O15f--4e-2At4g24026unknown proteinC.G.S.X.
0.062e-550Oryza sativaOs08g0119800AK060602.1--3e-2At2g33510protein bindingC.G.S.X.
0.041e+130Populus trichocarpaPtpAffx.203767.1.S1_atpmrna7443hypothetical protein-1e-2At1g61250SC3 (SECRETORY CARRIER 3)C.G.S.X.
0.043e+030Vitis vinifera1619561_atCB348102hypothetical protein LOC100254946-4e+0At4g3386540S ribosomal protein S29 (RPS29C)C.G.S.X.
0.042e+128Zea maysZm.4642.1.A1_atAI737769hypothetical protein LOC100272780-1e+0At5g04080unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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