Gene omics information

Query gene ID	TaAffx.8213.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	TaAffx.8213.1.S1_at	CA631501	-	-	8e-1	At1g68530	KCS6 (3-KETOACYL-COA SYNTHASE 6)	S.X.	H.G.	Please select
0.80	92.2	Ta.22770.1.S1_at	CK200775	-	-	2e+0	At5g13050	5-FCL (5-FORMYLTETRAHYDROFOLATE CYCLOLIGASE)	S.X.	H.G.	Please select
0.67	86.3	Ta.16296.1.S1_at	CA604223	-	-	9e+0	At5g07560	GRP20 (GLYCINE-RICH PROTEIN 20)	S.X.	H.G.	Please select
0.56	78.6	Ta.29418.1.A1_at	BJ283945	-	-	1e+0	At5g14180	MPL1 (MYZUS PERSICAE-INDUCED LIPASE 1)	S.X.	H.G.	Please select
0.46	66.8	Ta.16942.1.S1_a_at	CA615566	-	-	4e+0	At1g05136	unknown protein	S.X.	H.G.	Please select
0.33	46.9	Ta.8869.1.S1_at	BQ162539	-	-	9e-1	At2g04864	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
124.3	100.0	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
73.5	100.0	GSM314256	tissue type: germinating seed, root - rep3	GSE12508	Transcription patterns during wheat development
50.6	99.9	GSM314255	tissue type: germinating seed, root - rep2	GSE12508	Transcription patterns during wheat development
40.3	99.9	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
20.9	99.7	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
18.8	99.7	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
9.9	99.1	GSM314259	tissue type: germinating seed, embryo - rep3	GSE12508	Transcription patterns during wheat development
6.3	98.2	GSM314258	tissue type: germinating seed, embryo - rep2	GSE12508	Transcription patterns during wheat development
3.0	94.3	GSM314257	tissue type: germinating seed, embryo - rep1	GSE12508	Transcription patterns during wheat development
1.2	80.3	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.54	7e-51	200	Ta.26338.1.A1_x_at	CD490756	-	-	4e+0	At3g44290	anac060 (Arabidopsis NAC domain containing protein 60)	C.G.	S.X.	Please select
0.54	7e-51	200	Ta.26338.1.A1_at	CD490756	-	-	4e+0	At3g44290	anac060 (Arabidopsis NAC domain containing protein 60)	C.G.	S.X.	Please select
0.46	1e-42	173	Ta.16459.1.S1_x_at	CA606695	-	-	1e+0	At4g34300	glycine-rich protein	C.G.	S.X.	Please select
0.20	5e-24	111	Ta.15466.1.S1_at	CA486286	-	-	4e+0	At3g62190	DNAJ heat shock N-terminal domain-containing protein	C.G.	S.X.	Please select
0.33	7e-23	107	Ta.1355.1.S1_s_at	BE425944	-	-	3e+0	At2g28405	LCR32 (Low-molecular-weight cysteine-rich 32)	C.G.	S.X.	Please select
0.33	7e-23	107	Ta.1355.1.S1_at	BE425944	-	-	3e+0	At2g28405	LCR32 (Low-molecular-weight cysteine-rich 32)	C.G.	S.X.	Please select
0.16	7e-20	97	Ta.13778.2.A1_at	CA636212	-	-	1e+0	Atcg00510	-	C.G.	S.X.	Please select
0.28	3e-19	95	TaAffx.113766.1.S1_at	CA605482	-	-	1e+1	At5g35737	unknown protein	C.G.	S.X.	Please select
0.27	4e-18	91	Ta.13778.1.S1_at	BJ317095	-	-	1e+0	At3g15518	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	8e-1	34	Arabidopsis thaliana	At1g68530	843182	KCS6 (3-KETOACYL-COA SYNTHASE 6)	Encodes KCS6, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	3e-1	36	Glycine max	GmaAffx.20777.1.S1_at	BE819900	-	-	4e-8	At2g22830	SQE2 (squalene epoxidase 2)	C.G.	S.X.	Please select
0.46	9e-24	109	Hordeum vulgare	AF427791_CDS-25_at	AF427791_CDS-25	-	-	2e+1	Atmg00680	-	C.G.	S.X.	Please select
0.28	2e-15	83	Oryza sativa	Os12g0548700	AK058739.1	-	CI2C	1e+0	At4g14805	protease inhibitor/seed storage/lipid transfer protein (LTP)-related	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	2e-2	40	Populus trichocarpa	PtpAffx.219623.1.S1_at	pmrna35585	hypothetical protein	-	2e+1	At5g53940	yippee family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	1e+0	32	Vitis vinifera	1620787_s_at	BM438036	hypothetical protein LOC100263709	-	6e-40	At5g35680	eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putative	C.G.	S.X.	Please select
0.21	1e-19	95	Zea mays	Zm.301.1.A1_a_at	BM334689	subtilisin-chymotrypsin inhibitor CI-1B /// subtilisin-chymotrypsin inhibitor homolog1	-	2e+1	Atcg01270	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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