Gene omics information

Query gene ID	TaAffx.81797.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	TaAffx.81797.1.S1_at	CA681736	-	-	2e-2	At5g61710	unknown protein	S.X.	H.G.	Please select
0.67	86.3	TaAffx.5509.1.S1_at	CA708602	-	-	4e+0	At4g36800	RCE1 (RUB1 CONJUGATING ENZYME 1)	S.X.	H.G.	Please select
0.50	72.4	TaAffx.79639.1.S1_at	CA711551	-	-	4e+0	At1g17970	zinc finger (C3HC4-type RING finger) family protein	S.X.	H.G.	Please select
0.40	58.4	RPTR-Ta-L36849-1_at	RPTR-Ta-L36849-1	-	-	0			S.X.	H.G.	Please select
0.27	35.6	TaAffx.112085.1.S1_at	CA627212	-	-	4e+0	At4g15710	unknown protein	S.X.	H.G.	Please select
0.15	17.1	TaAffx.23406.1.S1_at	CA735527	-	-	9e-4	At3g53610	ATRAB8	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
22.7	99.8	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
19.2	99.7	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
14.2	99.5	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
12.7	99.4	GSM111195	genotype C25 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
11.9	99.4	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
11.4	99.3	GSM324490	Si+ B- rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
10.0	99.1	GSM111181	genotype C31 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
8.6	98.9	GSM138193	genotype B33 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
8.1	98.8	GSM138163	genotype E5 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
7.5	98.6	GSM111203	genotype A10 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	3e-1	36	TaAffx.78330.1.S1_at	BQ609555	-	-	2e-2	At5g62950	catalytic/ nucleotide binding	C.G.	S.X.	Please select
0.03	3e-1	36	TaAffx.6605.1.S1_at	CA682009	-	-	3e-4	At4g19100	unknown protein	C.G.	S.X.	Please select
0.01	3e-1	36	Ta.9068.1.S1_at	BJ320264	-	-	8e-8	At4g12610	transcription initiation factor IIF alpha subunit (TFIIF-alpha) family protein	C.G.	S.X.	Please select
0.02	3e-1	36	Ta.7602.1.S1_at	BJ250297	nucleosome assembly protein I	-	2e-26	At4g26110	NAP1	C.G.	S.X.	Please select
0.03	1e+0	34	TaAffx.37332.1.A1_at	BJ285008	-	-	3e-1	At1g02710	glycine-rich protein	C.G.	S.X.	Please select
0.02	1e+0	34	Ta.8142.1.S1_at	BQ752849	-	-	3e-15	At1g61620	phosphoinositide binding	C.G.	S.X.	Please select
0.02	1e+0	34	Ta.5897.1.S1_a_at	CA640915	-	-	2e+0	At1g63057	unknown protein	C.G.	S.X.	Please select
0.02	1e+0	34	Ta.5897.1.S1_x_at	CA640915	-	-	2e+0	At1g63057	unknown protein	C.G.	S.X.	Please select
0.02	1e+0	34	Ta.28770.1.S1_x_at	BM135093	-	-	5e-39	At4g25630	FIB2 (FIBRILLARIN 2)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	2e-2	40	Arabidopsis thaliana	At5g61710	836293	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	4e-1	36	Glycine max	PsAffx.psMY010iA10r_s_at	PsAffx.psMY010iA10r	-	-	1e-1	At1g12390	cornichon family protein	C.G.	S.X.	Please select
0.04	5e-1	34	Hordeum vulgare	Contig1519_s_at	Contig1519	-	-	3e-2	At4g19100	unknown protein	C.G.	S.X.	Please select
0.05	9e-3	42	Oryza sativa	OsAffx.26373.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	2e-2	40	Populus trichocarpa	PtpAffx.215883.1.S1_at	pmrna30334	hypothetical protein	-	2e-1	At1g09415	NIMIN-3 (NIM1-INTERACTING 3)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	3e-1	34	Vitis vinifera	1622524_at	CA811253	hypothetical protein LOC100254356	-	4e-9	At2g24830	zinc finger (CCCH-type) family protein / D111/G-patch domain-containing protein	C.G.	S.X.	Please select
0.03	2e+0	32	Zea mays	ZmAffx.729.1.S1_at	AI740018	-	-	2e-4	At4g02450	glycine-rich protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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