Gene omics information

Query gene ID TaAffx.80553.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.2TaAffx.80553.1.S1_atCA695392--4e+0At3g08890unknown proteinS.X.H.G.
0.1719.8Ta.25516.1.S1_x_atCD885585--2e-1At5g3980060S ribosomal protein-relatedS.X.H.G.
0.1011.3TaAffx.107512.1.S1_atCA698682--2e+1At1g78260RNA recognition motif (RRM)-containing proteinS.X.H.G.
0.0910.4TaAffx.55963.1.S1_atCA658960--4e+0At1g69660meprin and TRAF homology domain-containing protein / MATH domain-containing proteinS.X.H.G.
0.045.8TaAffx.51594.1.S1_atCA723204--1e+0At3g51810EM1 (LATE EMBRYOGENESIS ABUNDANT 1)S.X.H.G.
0.034.7TaAffx.55930.1.S1_atCA659349--6e+0At5g63240glycosyl hydrolase family protein 17S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
33.199.9GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
26.599.8GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
21.799.8GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
11.999.4GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
10.399.2GSM138188genotype F38a developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
9.399.0GSM138178genotype A88 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
8.498.9GSM250907Tc_7dpi_mock_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.998.4GSM138162genotype E5 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
6.898.4GSM138137Genotype Domain developing seed at 5 days after anthesis, biological rep3 location SBGSE5937Wheat expression level polymorphism study parental genotypes 2 biological reps from SB location
6.098.0GSM143519Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.047e-238TaAffx.25460.1.S1_atCA699644--4e+0At3g57500unknown proteinC.G.S.X.
0.083e-136TaAffx.13045.1.S1_atBJ216338--4e+0At5g26840unknown proteinC.G.S.X.
0.011e+034TaAffx.3722.1.S1_atCA685523--3e-29At3g11670DGD1 (DIGALACTOSYL DIACYLGLYCEROL DEFICIENT 1)C.G.S.X.
0.041e+034TaAffx.28197.1.S1_atCA663764--6e-2At3g04370PDLP4 (PLASMODESMATA-LOCATED PROTEIN 4)C.G.S.X.
0.011e+034TaAffx.143995.5.S1_atAY145086--1e-1At1g09430ACLA-3C.G.S.X.
0.011e+034TaAffx.143995.5.A1_atAY145086--1e-1At1g09430ACLA-3C.G.S.X.
0.031e+034Ta.18931.1.S1_x_atCA644446--2e-11At5g47870unknown proteinC.G.S.X.
0.031e+034Ta.18931.2.S1_a_atCA656734--2e-11At5g47870unknown proteinC.G.S.X.
0.031e+034Ta.18931.2.S1_x_atCA656734--2e-11At5g47870unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.034e+032Arabidopsis thalianaAt3g08890820038unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P---C.G.S.X.
0.032e+034Glycine maxGmaAffx.90548.1.S1_x_atCF806273--2e-1At1g54200unknown proteinC.G.S.X.
0.031e-136Hordeum vulgareHT04E01r_atHT04E01r--1e+0At3g18250unknown proteinC.G.S.X.
0.032e+034Oryza sativaOs09g0512800AA753646-Conserved hypothetical protein2e-1At2g21510DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
0.036e+032Populus trichocarpaPtpAffx.8052.1.S1_atDN502744--4e+0At4g25690unknown proteinC.G.S.X.
0.038e-236Vitis vinifera1620364_atCB004253--1e+0At2g18690unknown proteinC.G.S.X.
0.032e+032Zea maysZm.17948.1.A1_atCF630514--2e-2At3g24570peroxisomal membrane 22 kDa family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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