CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID TaAffx.80244.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.76 90.1 TaAffx.80244.1.S1_at CA699409 - - 4e+0 At5g08060 unknown protein S.X. H.G.
0.61 82.0 TaAffx.80668.1.S1_at CA694164 - - 1e+0 At5g47700 60S acidic ribosomal protein P1 (RPP1C) S.X. H.G.
0.58 79.2 Ta.11314.2.S1_x_at CA619157 - - 4e+0 At5g40500 unknown protein S.X. H.G.
0.57 79.2 TaAffx.15602.1.S1_at BG909974 - - 3e+0 Atmg01350 - S.X. H.G.
0.51 73.0 TaAffx.108775.1.S1_at CA684251 - - 3e+0 At5g47570 unknown protein S.X. H.G.
0.50 72.4 TaAffx.99206.1.S1_at CA727631 - - 3e-1 At4g21610 LOL2 (LSD ONE LIKE 2) S.X. H.G.
0.47 67.9 TaAffx.5086.1.S1_at CA723258 - - 5e-2 At3g50550 unknown protein S.X. H.G.
0.45 65.2 TaAffx.113756.1.S1_at CA605644 - - 1e-3 At5g04250 OTU-like cysteine protease family protein S.X. H.G.
0.44 64.5 Ta.25522.2.S1_x_at CA683586 - - 2e-1 At4g13560 UNE15 (unfertilized embryo sac 15) S.X. H.G.
0.44 64.5 TaAffx.51452.1.S1_x_at CA724758 - - 1e+1 At5g56369 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
14.4 99.5 GSM298070 Leaf tissue of Paragon at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
14.1 99.5 GSM298067 Leaf tissue of Paragon at 5 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
7.8 98.7 GSM250899 TcLr34_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.5 98.6 GSM250897 TcLr1_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.0 98.5 GSM250890 Tc_3dpi_inoculated_rep2 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.3 98.2 GSM250900 TcLr34_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.5 97.8 GSM250895 Tc_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.3 97.6 GSM298090 Leaf tissue of Solstice at 5 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
5.2 97.5 GSM298069 Leaf tissue of Paragon at 9 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
5.1 97.5 GSM250896 Tc_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e-1 36 Ta.22221.1.S1_a_at CD893383 - - 9e+0 At5g43280 ATDCI1 (DELTA(3,5),DELTA(2,4)-DIENOYL-COA ISOMERASE 1) C.G. S.X.
0.02 3e-1 36 Ta.22221.1.S1_x_at CD893383 - - 9e+0 At5g43280 ATDCI1 (DELTA(3,5),DELTA(2,4)-DIENOYL-COA ISOMERASE 1) C.G. S.X.
0.02 3e-1 36 Ta.22221.1.S1_at CD893383 - - 9e+0 At5g43280 ATDCI1 (DELTA(3,5),DELTA(2,4)-DIENOYL-COA ISOMERASE 1) C.G. S.X.
0.03 1e+0 34 TaAffx.29573.1.S1_at CA639684 - - 4e+0 At5g42635 glycine-rich protein C.G. S.X.
0.03 1e+0 34 TaAffx.124313.1.A1_at CK211103 - - 1e+0 At2g30560 glycine-rich protein C.G. S.X.
0.01 1e+0 34 Ta.7295.1.S1_at CK206196 - - 3e-16 At4g36940 NAPRT1 (NICOTINATE PHOSPHORIBOSYLTRANSFERASE 1) C.G. S.X.
0.01 1e+0 34 Ta.6735.1.S1_at BT009261.1 - - 1e+0 At2g40220 ABI4 (ABA INSENSITIVE 4) C.G. S.X.
0.04 4e+0 32 TaAffx.91867.1.A1_at BJ297939 - - 1e+0 At3g10986 unknown protein C.G. S.X.
0.04 4e+0 32 TaAffx.85386.1.S1_at CA623132 - - 9e+0 At5g64490 binding C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 4e+0 32 Arabidopsis thaliana At5g08060 830700 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PO - - - C.G. S.X.
0.03 2e+0 34 Glycine max HgAffx.17411.1.S1_at CB374994 - - 6e-2 At3g13910 unknown protein C.G. S.X.
0.03 1e-1 36 Hordeum vulgare Contig25227_at Contig25227 - - 1e+0 At5g66000 unknown protein C.G. S.X.
0.23 3e-55 216 Oryza sativa Os04g0481300 AK067096.1 - Generic methyltransferase domain containingprotein 1e-1 At3g01660 methyltransferase C.G. S.X.
0.04 1e-1 38 Populus trichocarpa PtpAffx.218727.1.S1_at pmrna34449 hypothetical protein - 7e-1 At5g15970 KIN2 C.G. S.X.
0.03 2e+1 28 Vitis vinifera 1620705_a_at CD797845 hypothetical protein LOC100261014 - 3e+0 At5g60350 unknown protein C.G. S.X.
0.03 5e-1 34 Zea mays Zm.11620.1.A1_at BM379366 - - 3e-1 At2g41440 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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