Gene omics information

Query gene ID	TaAffx.79610.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.80	92.2	TaAffx.79610.1.S1_at	CA711937	-	-	9e-1	At1g26762	unknown protein	S.X.	H.G.	Please select
0.60	81.0	TaAffx.51916.1.S1_at	CA716507	-	-	3e+0	At4g26010	peroxidase, putative	S.X.	H.G.	Please select
0.50	72.4	TaAffx.9551.1.S1_at	CA595241	-	-	1e+0	At2g36410	unknown protein	S.X.	H.G.	Please select
0.14	15.8	TaAffx.27409.1.S1_at	CA677175	-	-	4e+0	At1g02405	proline-rich family protein	S.X.	H.G.	Please select
0.12	13.3	Ta.28142.2.S1_at	CA644586	-	-	3e-1	At5g47700	60S acidic ribosomal protein P1 (RPP1C)	S.X.	H.G.	Please select
0.03	4.7	Ta.7193.2.S1_at	BG904530	-	-	3e+0	At2g34690	ACD11 (ACCELERATED CELL DEATH 11)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
20.6	99.7	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
19.5	99.7	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
16.4	99.6	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
14.9	99.5	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
13.2	99.5	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.6	99.1	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.7	98.4	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.5	98.3	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.8	97.2	GSM298089	Leaf tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.0	96.3	GSM143513	Thatcher_Lr34 (resistant), mock inoculated distal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	1e-3	44	TaAffx.65594.1.S1_at	BJ236677	-	-	1e+0	At5g43410	ethylene-responsive factor, putative	C.G.	S.X.	Please select
0.04	1e-2	40	TaAffx.38200.1.S1_at	BJ245366	-	-	1e+0	At5g46730	glycine-rich protein	C.G.	S.X.	Please select
0.03	1e-2	40	Ta.26027.1.A1_s_at	CD454753	-	-	7e-3	At5g20650	COPT5	C.G.	S.X.	Please select
0.03	1e-2	40	Ta.26027.1.A1_at	CD454753	-	-	7e-3	At5g20650	COPT5	C.G.	S.X.	Please select
0.02	2e-1	36	TaAffx.61848.1.S1_at	BG904167	-	-	6e-1	At3g48450	nitrate-responsive NOI protein, putative	C.G.	S.X.	Please select
0.05	2e-1	36	TaAffx.23064.1.S1_at	CA740990	-	-	3e-1	At4g22600	unknown protein	C.G.	S.X.	Please select
0.02	2e-1	36	TaAffx.128678.1.S1_s_at	CA610031	-	-	2e+0	At3g07760	-	C.G.	S.X.	Please select
0.02	2e-1	36	TaAffx.128678.1.S1_at	CA610031	-	-	2e+0	At3g07760	-	C.G.	S.X.	Please select
0.04	2e-1	36	TaAffx.12685.1.S1_at	BJ244725	-	-	4e+0	At4g36900	RAP2.10 (related to AP2 10)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	9e-1	34	Arabidopsis thaliana	At1g26762	5007726	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	1e+0	34	Glycine max	PsAffx.CL1382Contig1_at	PsAffx.CL1382Contig1	-	-	1e+0	At1g75860	unknown protein	C.G.	S.X.	Please select
0.10	4e-1	34	Hordeum vulgare	Contig18358_x_at	Contig18358	-	-	2e-1	At3g52380	CP33	C.G.	S.X.	Please select
0.11	8e-9	61	Oryza sativa	Os09g0242050	9637.m00421	-	-	1e-1	At4g03965	protein binding / zinc ion binding	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e+1	30	Populus trichocarpa	PtpAffx.5949.1.A1_at	CF236953	hypothetical protein	-	9e-8	At5g18850	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	4e+0	30	Vitis vinifera	1611400_at	CF510785	hypothetical protein LOC100266087	-	1e+0	At5g30520	unknown protein	C.G.	S.X.	Please select
0.05	6e-3	40	Zea mays	ZmAffx.1077.1.A1_at	AI948123	hypothetical protein LOC100274739	-	9e+0	At5g23290	PDF5 (PREFOLDIN 5)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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