Gene omics information

Query gene ID TaAffx.79435.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.2TaAffx.79435.1.S1_atCA715785--2e-1At5g10140FLC (FLOWERING LOCUS C)S.X.H.G.
0.023.6TaAffx.53068.1.S1_atCA696960--1e+0At1g32760glutaredoxin family proteinS.X.H.G.
0.023.6TaAffx.122619.1.S1_atCA731643--4e+0At4g18500unknown proteinS.X.H.G.
0.012.4TaAffx.110661.1.S1_atCA656444--3e+0At4g19100unknown proteinS.X.H.G.
0.000.7TaAffx.85202.1.S1_atCA619121--1e+0At2g46330AGP16 (ARABINOGALACTAN PROTEIN 16)S.X.H.G.
0.000.7TaAffx.109199.1.S1_atCA678792--3e-1At4g35025unknown proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
29.699.8GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription survey
13.499.5GSM138187genotype F38b developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
11.499.3GSM143497Jupateco_Lr34 (susceptible), mock inoculated basal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
10.799.2GSM143524Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
8.898.9GSM250908Tc_7dpi_inoculated_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.798.9GSM138201genotype F48 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
7.998.7GSM111195genotype C25 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
7.598.6GSM314273tissue type: floral bracts, before anthesis - rep2GSE12508Transcription patterns during wheat development
7.298.5GSM111216genotype D15 developing seed at 5 days after anthesis, biological rep1GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
6.698.3GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat development
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.622e-63242TaAffx.84320.1.S1_atCA639681--4e+0At3g22110PAC1C.G.S.X.
0.285e-39161TaAffx.32160.1.S1_atCA600052--3e-1At3g06750hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.498e-29127TaAffx.107252.1.S1_atCA703600--2e+0At4g30410transcription factorC.G.S.X.
0.096e-857TaAffx.94040.1.A1_atBG907081--3e+0At2g05510glycine-rich proteinC.G.S.X.
0.063e-342TaAffx.54551.2.S1_atCA680104--1e+0At5g54490PBP1 (PINOID-BINDING PROTEIN 1)C.G.S.X.
0.063e-342TaAffx.54551.1.S1_s_atCA596071--2e+1Atcg00790-C.G.S.X.
0.032e-136Ta.7509.3.S1_atCK205485--1e-1Atmg01050-C.G.S.X.
0.049e-134TaAffx.50923.1.S1_atCA733414--3e-1At5g03030DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
0.049e-134TaAffx.25533.1.S1_atCA698749--1e+0At5g02160unknown proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.052e-136Arabidopsis thalianaAt5g10140830878FLC (FLOWERING LOCUS C)MADS-box protein encoded by FLOWERING LOCUS C - transcription factor that functions as a repressor of floral transition and contributes to temperature compensation of the circadian clock. Expression is downregulated during cold treatment. Vernalization, FRI and the autonomous pathway all influence the state of FLC chromatin. Both maternal and paternal alleles are reset by vernalization, but their earliest activation differs in timing and location. Histone H3 trimethylation at lysine 4 and histone acetylation are associated with active FLC expression, whereas histone deacetylation and histone H3 dimethylation at lysines 9 and 27 are involved in FLC repression. Expression is also repressed by two small RNAs (30- and 24-nt) complementary to the FLC sense strand 3 to the polyA site. The small RNAs are most likely derived from an antisense transcript of FLC. Interacts with SOC1 and FT chromatin in vivo. Member of a protein complex.---C.G.S.X.
0.041e+034Glycine maxPsAffx.psHB038xB18f_s_atPsAffx.psHB038xB18f--5e+0At5g01020protein kinase family proteinC.G.S.X.
0.044e-134Hordeum vulgareContig16010_atContig16010--2e+1Atmg01040-C.G.S.X.
0.044e-136Oryza sativaOs07g06339009635.m04418--1e+0At1g51400photosystem II 5 kD proteinC.G.S.X.
0.057e-238Populus trichocarpaPtpAffx.217018.1.S1_atpmrna32121hypothetical protein-2e+0At3g06270protein phosphatase 2C, putative / PP2C, putativeC.G.S.X.
0.034e+030Vitis vinifera1621923_atCF414969hypothetical protein LOC100250874-1e-56At1g70600structural constituent of ribosomeC.G.S.X.
0.044e-134Zea maysZm.17331.1.A1_atCF631030--1e-3At5g51640YLS7C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage