Gene omics information

Query gene ID TaAffx.78808.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.2TaAffx.78808.1.S1_atCA726999--8e-1At4g33660unknown proteinS.X.H.G.
0.1011.3TaAffx.12644.1.S1_atBJ247681--4e-1At1g18800NRP2 (NAP1-RELATED PROTEIN 2)S.X.H.G.
0.089.4TaAffx.114160.1.S1_atCA597642--1e+0At4g13720inosine triphosphate pyrophosphatase, putative / HAM1 family proteinS.X.H.G.
0.034.7Ta.25374.1.A1_atCD491547--3e-8At5g56360calmodulin-binding proteinS.X.H.G.
0.012.4Ta.3083.2.A1_atBJ254365--4e+0At3g05602unknown proteinS.X.H.G.
0.000.7Ta.20393.1.S1_x_atCA485809--3e-1At1g78320ATGSTU23 (GLUTATHIONE S-TRANSFERASE TAU 23)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
45.199.9GSM111145genotype RL4452 developing seed at 5 days after anthesis, biological rep1GSE4929wheat expression level polymorphism study parental genotypes 2 biological reps
28.899.8GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
14.199.5GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
12.799.4GSM298061Crown tissue of Harnesk at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivars
11.799.3GSM138174genotype A81 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
11.799.3GSM111193genotype F38a developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
11.699.3GSM138154genotype H5 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
10.899.2GSM111208genotype F36 developing seed at 5 days after anthesis, biological rep1GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
10.899.2GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological reps
10.299.2GSM314289tissue type: 22 DAP endosperm - rep3GSE12508Transcription patterns during wheat development
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e-342Ta.2927.1.S1_s_atBJ207394GA-induced protein-2e-2At3g10185-C.G.S.X.
0.031e-240TaAffx.97536.1.S1_atAJ613610--2e+0At3g45960ATEXLA3 (arabidopsis thaliana expansin-like a3)C.G.S.X.
0.041e-240TaAffx.120375.1.A1_atBJ227421--1e+0At1g30475-C.G.S.X.
0.045e-238TaAffx.86959.1.S1_s_atCA598144--4e+0At5g65130AP2 domain-containing transcription factor, putativeC.G.S.X.
0.035e-238TaAffx.109263.1.S1_atBQ605555--9e+0At5g03840TFL1 (TERMINAL FLOWER 1)C.G.S.X.
0.035e-238Ta.6095.1.S1_atBJ250295--5e-1At1g77100peroxidase, putativeC.G.S.X.
0.025e-238Ta.5510.1.S1_atBQ789475--5e-2At5g13700ATPAO1 (ARABIDOPSIS THALIANA POLYAMINE OXIDASE 1)C.G.S.X.
0.045e-238Ta.28336.1.S1_x_atCK152774--1e-1At3g56910PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5)C.G.S.X.
0.045e-238Ta.28336.2.S1_atCA634978--3e-1At1g10588-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.058e-134Arabidopsis thalianaAt4g33660829507unknown proteinF:unknown;P:unknown;C:unknown;MPOFBVA---C.G.S.X.
0.052e-240Glycine maxPsAffx.psHB015xO10f_atPsAffx.psHB015xO10f--7e-2At4g19270unknown proteinC.G.S.X.
0.044e-444Hordeum vulgareContig22184_atContig22184--5e+0At5g56070unknown proteinC.G.S.X.
0.062e-344Oryza sativaOsAffx.695.1.S1_at---0C.G.S.X.
0.041e+034Populus trichocarpaPtpAffx.454.37.A1_a_atCV225454hypothetical protein-1e+0At1g66200ATGSR2C.G.S.X.
0.071e+032Vitis vinifera1620940_atCF201899.1--2e+1At5g66990RWP-RK domain-containing proteinC.G.S.X.
0.049e-236Zea maysZm.1443.1.A1_atBI358844hypothetical protein LOC100276732-3e-1At5g23260TT16 (TRANSPARENT TESTA16)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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