Gene omics information

Query gene ID	TaAffx.76554.1.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	86.3	TaAffx.76554.1.A1_at	BJ307578	-	-	1e+0	At5g54320	unknown protein	S.X.	H.G.	Please select
0.67	86.3	Ta.5909.3.A1_x_at	BJ298528	-	-	7e+0	At4g27350	unknown protein	S.X.	H.G.	Please select
0.55	76.8	Ta.9217.1.S1_at	BT009612.1	-	-	1e-1	At2g22490	CYCD2	S.X.	H.G.	Please select
0.50	72.4	Ta.11311.1.A1_at	BQ169821	-	-	5e+0	At4g00940	Dof-type zinc finger domain-containing protein	S.X.	H.G.	Please select
0.43	62.2	TaAffx.13383.1.A1_at	BG904557	-	-	8e-1	At1g17800	plastocyanin-like domain-containing protein	S.X.	H.G.	Please select
0.38	54.7	Ta.7428.2.A1_a_at	CA736575	-	-	2e+0	At3g04780	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
6.0	98.0	GSM314284	tissue type: 22 DAP embryo - rep1	GSE12508	Transcription patterns during wheat development
5.6	97.8	GSM314285	tissue type: 22 DAP embryo - rep2	GSE12508	Transcription patterns during wheat development
5.3	97.6	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.3	97.6	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
4.9	97.3	GSM139919	Anther diplotene-anaphaseI rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.9	97.3	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.2	96.6	GSM314286	tissue type: 22 DAP embryo - rep3	GSE12508	Transcription patterns during wheat development
4.2	96.6	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.1	96.4	GSM139912	Anther pre-meiosis rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.1	96.4	GSM139921	Anther diplotene-anaphaseI rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	3e-1	36	Ta.8478.2.A1_a_at	CK169696	-	-	5e+0	At4g21320	HSA32 (HEAT-STRESS-ASSOCIATED 32)	C.G.	S.X.	Please select
0.04	1e+0	34	TaAffx.42425.1.S1_at	AJ615824	-	-	6e-1	At3g18690	MKS1 (MAP kinase substrate 1)	C.G.	S.X.	Please select
0.03	1e+0	34	Ta.10065.1.S1_at	CD937007	-	-	1e+0	At3g30725	AtGDU6 (Arabidopsis thaliana GLUTAMINE DUMPER 6)	C.G.	S.X.	Please select
0.04	4e+0	32	TaAffx.87444.1.S1_at	CA604897	-	-	6e-1	At3g26660	LBD24 (LOB DOMAIN-CONTAINING PROTEIN 24)	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.86598.1.S1_at	CA604844	-	-	4e+0	At3g10520	AHB2 (ARABIDOPSIS HAEMOGLOBIN 2)	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.58074.1.S1_at	CA622619	-	-	7e-1	At1g52905	unknown protein	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.43598.1.A1_at	CK208349	-	-	5e+0	At5g56810	F-box family protein	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.107625.1.S1_at	CA697293	-	-	4e+0	At4g24240	WRKY7	C.G.	S.X.	Please select
0.02	4e+0	32	Ta.4121.1.A1_at	BJ259299	-	-	4e-1	At5g53880	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	1e+0	34	Arabidopsis thaliana	At5g54320	835520	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e+0	34	Glycine max	GmaAffx.10586.1.A1_at	BU551200	-	-	4e+0	At5g06510	NF-YA10 (NUCLEAR FACTOR Y, SUBUNIT A10)	C.G.	S.X.	Please select
0.04	8e+0	30	Hordeum vulgare	Contig13497_s_at	Contig13497	-	-	1e-1	At5g22600	-	C.G.	S.X.	Please select
0.04	8e+0	32	Oryza sativa	OsAffx.31957.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e+0	34	Populus trichocarpa	PtpAffx.103655.1.A1_at	CK096965	hypothetical protein	-	3e-1	At4g14746	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	1e+0	32	Vitis vinifera	1619690_at	CB975062	-	-	9e-1	At5g49800	-	C.G.	S.X.	Please select
0.03	7e+0	30	Zea mays	Zm.5788.1.A1_at	AI600957	hypothetical protein LOC100280278	-	5e+0	At5g55190	RAN3 (RAN GTPASE 3)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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