Gene omics information

Query gene ID	TaAffx.73323.1.S1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.2	TaAffx.73323.1.S1_at	CA713945	-	-	3e+0	At5g45870	Bet v I allergen family protein	S.X.	H.G.	Please select
0.67	86.3	TaAffx.78517.1.S1_at	CA731451	-	-	4e+0	At2g25720	unknown protein	S.X.	H.G.	Please select
0.60	81.0	Ta.30411.1.S1_at	CK209297	-	-	5e+0	At5g62280	unknown protein	S.X.	H.G.	Please select
0.50	72.4	TaAffx.118620.1.S1_at	BJ316617	-	-	1e+0	At2g31560	unknown protein	S.X.	H.G.	Please select
0.47	67.9	TaAffx.115939.2.S1_at	CA677586	-	-	7e-2	At1g30800	-	S.X.	H.G.	Please select
0.43	62.2	TaAffx.77881.1.S1_at	CA741326	-	-	2e+1	Atcg00065	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
18.8	99.7	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.5	99.1	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.0	99.0	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.8	98.9	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.8	98.7	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
7.3	98.6	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.7	98.4	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.4	96.8	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.3	96.7	GSM298056	Leaf tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.0	96.3	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.43	1e-52	206	Ta.4533.2.S1_at	BJ267704	-	-	4e+0	At5g47590	heat shock protein-related	C.G.	S.X.	Please select
0.09	4e-15	81	Ta.8965.3.S1_at	CF182122	-	-	6e+0	At4g33560	unknown protein	C.G.	S.X.	Please select
0.04	1e-3	44	Ta.10234.2.S1_at	BJ256580	-	-	5e-1	At5g54630	zinc finger protein-related	C.G.	S.X.	Please select
0.04	1e-3	44	Ta.10234.2.S1_x_at	BJ256580	-	-	5e-1	At5g54630	zinc finger protein-related	C.G.	S.X.	Please select
0.04	1e-2	40	Ta.25243.2.S1_at	BJ270284	-	-	4e+0	At4g14270	-	C.G.	S.X.	Please select
0.04	6e-2	38	TaAffx.112301.1.S1_at	CA625127	-	-	2e-2	At3g46560	TIM9	C.G.	S.X.	Please select
0.04	2e-1	36	TaAffx.85633.1.S1_at	CA621005	-	-	1e-9	At3g60245	60S ribosomal protein L37a (RPL37aC)	C.G.	S.X.	Please select
0.05	2e-1	36	TaAffx.81978.1.S1_at	CA679472	-	-	3e-1	At1g05300	ZIP5	C.G.	S.X.	Please select
0.04	2e-1	36	TaAffx.5293.1.S1_x_at	CA715930	-	-	1e+1	At5g60460	sec61beta family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	3e+0	32	Arabidopsis thaliana	At5g45870	834627	Bet v I allergen family protein	F:molecular_function unknown;P:unknown;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e+0	34	Glycine max	PsAffx.CL1861Contig1_at	PsAffx.CL1861Contig1	-	-	8e-1	At1g04445	zinc finger (C2H2 type) family protein	C.G.	S.X.	Please select
0.04	4e-1	34	Hordeum vulgare	Contig16048_at	Contig16048	-	-	8e-1	At1g24880	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	C.G.	S.X.	Please select
0.06	4e-4	46	Oryza sativa	OsAffx.958.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	3e-1	36	Populus trichocarpa	Ptp.3604.1.S1_at	DN492802	ethylene receptor 1	-	1e+0	At1g01471	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	3e-1	34	Vitis vinifera	1618277_at	CF568829	hypothetical protein LOC100265689	-	3e-48	At1g79530	GAPCP-1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE OF PLASTID 1)	C.G.	S.X.	Please select
0.04	9e-2	36	Zea mays	Zm.12462.1.A1_at	AW066887	hypothetical protein LOC100277431	-	8e-1	At5g45630	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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