Gene omics information

Query gene ID	TaAffx.72723.1.S1_s_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.57	79.2	TaAffx.72723.1.S1_s_at	BE427906	-	-	7e+0	At5g56170	-	S.X.	H.G.	Please select
0.71	88.0	TaAffx.72723.1.S1_at	BE427906	-	-	7e+0	At5g56170	-	S.X.	H.G.	Please select
0.63	83.1	Ta.30680.2.S1_a_at	BJ219073	-	-	2e-2	At2g40670	ARR16 (ARABIDOPSIS RESPONSE REGULATOR 16)	S.X.	H.G.	Please select
0.60	81.0	Ta.25992.1.S1_at	CK206968	-	-	6e-44	At5g06600	UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12)	S.X.	H.G.	Please select
0.50	72.4	TaAffx.50236.1.S1_at	CA744089	-	-	1e+0	At4g21020	late embryogenesis abundant domain-containing protein / LEA domain-containing protein	S.X.	H.G.	Please select
0.36	51.9	Ta.9034.3.A1_at	BJ230516	-	-	2e+1	At5g59880	ADF3 (ACTIN DEPOLYMERIZING FACTOR 3)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
9.2	99.0	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.0	97.4	GSM298063	Crown tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.4	96.8	GSM298059	Crown tissue of Harnesk at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.3	96.7	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.0	96.3	GSM298093	Crown tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.9	96.1	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.9	96.1	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.9	96.1	GSM298083	Crown tissue of Solstice at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.9	96.1	GSM143519	Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.8	96.0	GSM298091	Leaf tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.94	0	908	TaAffx.72723.1.S1_at	BE427906	-	-	7e+0	At5g56170	-	C.G.	S.X.	Please select
0.02	4e-1	36	TaAffx.44372.1.A1_at	CK211169	-	-	3e-1	At5g54460	wound-responsive protein-related	C.G.	S.X.	Please select
0.03	4e-1	36	Ta.4605.3.S1_a_at	BJ246787	-	-	7e-5	At3g61860	RSP31	C.G.	S.X.	Please select
0.03	4e-1	36	Ta.28888.3.S1_a_at	CA618143	-	-	2e-2	At5g13510	ribosomal protein L10 family protein	C.G.	S.X.	Please select
0.03	4e-1	36	Ta.28888.3.S1_x_at	CA618143	-	-	2e-2	At5g13510	ribosomal protein L10 family protein	C.G.	S.X.	Please select
0.02	4e-1	36	Ta.28888.1.S1_at	CA617384	-	-	4e-5	At5g13510	ribosomal protein L10 family protein	C.G.	S.X.	Please select
0.02	4e-1	36	Ta.28888.1.S1_x_at	CA617384	-	-	4e-5	At5g13510	ribosomal protein L10 family protein	C.G.	S.X.	Please select
0.03	2e+0	34	TaAffx.97864.1.S1_at	BQ801048	-	-	3e-1	At1g22890	unknown protein	C.G.	S.X.	Please select
0.02	2e+0	34	TaAffx.64488.1.S1_at	BJ295140	-	-	5e+0	At4g20030	RNA recognition motif (RRM)-containing protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	7e+0	32	Arabidopsis thaliana	At5g56170	835716	-	F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	6e-1	36	Glycine max	Gma.8152.2.A1_at	BU548686	-	-	5e+0	At5g55790	unknown protein	C.G.	S.X.	Please select
0.02	2e-1	36	Hordeum vulgare	Contig26360_at	Contig26360	-	-	1e+0	At2g39040	peroxidase, putative	C.G.	S.X.	Please select
0.23	2e-11	71	Oryza sativa	Os.27997.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	4e-2	40	Populus trichocarpa	PtpAffx.98801.1.S1_at	CV249157	hypothetical protein	-	6e-3	At1g63310	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	5e-1	34	Vitis vinifera	1612421_at	CF213299	hypothetical protein LOC100262002	-	4e+0	At5g13080	WRKY75	C.G.	S.X.	Please select
0.03	5e-2	38	Zea mays	Zm.6476.1.A1_at	BG266009	hypothetical protein LOC100275764	-	2e+1	At3g48231	LCR48 (Low-molecular-weight cysteine-rich 48)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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