Gene omics information

Query gene ID TaAffx.7239.1.S1_at
Gene name
Organism Triticum aestivum


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9498.9TaAffx.7239.1.S1_atCA664369--8e-1At4g09984LCR34 (Low-molecular-weight cysteine-rich 34)S.X.H.G.
0.4362.2TaAffx.27377.1.S1_atCA677598--1e+1At5g01530chlorophyll A-B binding protein CP29 (LHCB4)S.X.H.G.
0.2227.1TaAffx.112374.1.S1_atCA624514--3e-1At4g20280TAF11 (TBP-ASSOCIATED FACTOR 11)S.X.H.G.
0.1618.2Ta.7193.3.S1_atCA718160--1e+1At5g08400unknown proteinS.X.H.G.
0.1011.3Ta.30411.1.S1_atCK209297--5e+0At5g62280unknown proteinS.X.H.G.
0.089.4Ta.3501.3.A1_atCA658638--3e-1At5g08330TCP family transcription factor, putativeS.X.H.G.
0.067.6TaAffx.105451.1.S1_atCA734135--1e+0At3g06730thioredoxin family proteinS.X.H.G.
0.067.6TaAffx.50210.1.S1_atCA744417--7e-2At1g60880AGL56S.X.H.G.
0.045.8TaAffx.111583.1.S1_x_atCA637262--1e+1At5g02440unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
17.799.7GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
13.799.5GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
13.399.5GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.498.6GSM298068Leaf tissue of Paragon at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivars
6.898.4GSM143520Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.998.0GSM246391SB62_Stem_ rep2_at anthesisGSE9767Genotypic differences in water soluble carbohydrate metabolism in stem
5.897.9GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.097.4GSM143512Thatcher_Lr34 (resistant), mock inoculated distal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.097.4GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivars
4.797.1GSM250908Tc_7dpi_inoculated_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e-136Ta.296.2.A1_atBJ228344--4e+0At5g39530unknown proteinC.G.S.X.
0.042e-136Ta.296.2.A1_a_atBJ228344--4e+0At5g39530unknown proteinC.G.S.X.
0.053e+032TaAffx.27189.1.S1_atCA680113--3e+0At5g38080unknown proteinC.G.S.X.
0.043e+032TaAffx.27008.1.S1_atCA682411--4e+0At1g59835unknown proteinC.G.S.X.
0.023e+032Ta.6363.1.S1_atCN011293--2e-5At2g24740SDG21 (SET DOMAIN GROUP 21)C.G.S.X.
0.033e+032Ta.2677.2.S1_atBJ313192--5e+0At5g19510elongation factor 1B alpha-subunit 2 (eEF1Balpha2)C.G.S.X.
0.023e+032Ta.1920.1.S1_atBE470638MDGD synthase type A-6e-13At4g31780MGD1 (MONOGALACTOSYL DIACYLGLYCEROL SYNTHASE 1)C.G.S.X.
0.053e+032Ta.18477.1.S1_atCA637527--1e-1At4g36740ATHB40 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 40)C.G.S.X.
0.021e+130TaAffx.91475.1.S1_atBJ316922--1e-1At1g01530AGL28 (AGAMOUS-LIKE 28)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.058e-134Arabidopsis thalianaAt4g099843770009LCR34 (Low-molecular-weight cysteine-rich 34)Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family.---C.G.S.X.
0.044e+032Glycine maxHgAffx.21181.1.S1_atBI748572--1e+1At5g30341unknown proteinC.G.S.X.
0.036e+030Hordeum vulgareHVSMEk0014L04r2_atHVSMEk0014L04r2--1e+0At4g37450AGP18 (ARABINOGALACTAN PROTEIN 18)C.G.S.X.
0.036e+032Oryza sativaOsAffx.29046.1.S1_at---0C.G.S.X.
0.042e-240Populus trichocarpaPtpAffx.52191.1.S1_atCK094942--5e-28At1g53430leucine-rich repeat family protein / protein kinase family proteinC.G.S.X.
0.044e-340Vitis vinifera1620780_atCD719871--5e+0At5g41530-C.G.S.X.
0.033e-134Zea maysZm.10110.1.A1_atBM380771--2e+0At5g58470TAF15b (TBP-ASSOCIATED FACTOR 15b)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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