CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID TaAffx.72097.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.73 89.1 TaAffx.72097.1.S1_at BJ260927 - - 8e+0 At5g41450 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.60 81.0 TaAffx.58795.1.S1_at CA615520 - - 7e-2 At3g51710 curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein S.X. H.G.
0.18 21.0 TaAffx.3444.1.S1_at BQ801852 - - 2e-6 At1g02080 transcriptional regulator-related S.X. H.G.
0.13 14.6 Ta.15821.1.S1_at BQ236446 - - 6e-4 At2g46060 transmembrane protein-related S.X. H.G.
0.07 8.6 Ta.7416.1.A1_at BJ265665 - - 2e+0 At5g63530 ATFP3 S.X. H.G.
0.05 6.7 Ta.5661.1.S1_at BQ802737 - - 1e-16 At3g43240 ARID/BRIGHT DNA-binding domain-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.5 96.9 GSM314269 tissue type: immature inflorescence - rep1 GSE12508 Transcription patterns during wheat development
4.4 96.8 GSM314275 tissue type: pistil, before anthesis - rep1 GSE12508 Transcription patterns during wheat development
4.4 96.8 GSM314273 tissue type: floral bracts, before anthesis - rep2 GSE12508 Transcription patterns during wheat development
4.0 96.3 GSM314277 tissue type: pistil, before anthesis - rep3 GSE12508 Transcription patterns during wheat development
3.5 95.4 GSM314274 tissue type: floral bracts, before anthesis - rep3 GSE12508 Transcription patterns during wheat development
3.0 94.3 GSM298092 Crown tissue of Solstice at 3 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
3.0 94.3 GSM314270 tissue type: immature inflorescence - rep2 GSE12508 Transcription patterns during wheat development
3.0 94.3 GSM250900 TcLr34_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.8 93.6 GSM250895 Tc_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.8 93.6 GSM298076 Crown tissue of Paragon at 9 weeks post germination, biological rep 2 GSE11774 Expression data from cold treated wheat cultivars
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.15 5e-35 149 Ta.10439.1.A1_at BJ251378 - - 1e+0 At4g28395 ATA7 C.G. S.X.
0.29 6e-19 95 Ta.6430.1.S1_at BQ607375 - - 2e+1 At5g55810 AtNMNAT (A. thaliana nicotinate/nicotinamide mononucleotide adenyltransferase) C.G. S.X.
0.04 3e-5 50 TaAffx.84205.1.S1_at CA642439 - - 1e+0 At5g62460 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.03 1e-1 38 TaAffx.9063.1.S1_at CA614129 - - 4e+0 At4g11300 unknown protein C.G. S.X.
0.02 2e+0 34 TaAffx.24078.1.A1_at BJ294288 - - 4e+0 At4g33740 unknown protein C.G. S.X.
0.02 2e+0 34 Ta.6802.1.A1_at CD887504 - - 6e+0 At5g42040 RPN12b (Regulatory Particle Non-ATPase 12b) C.G. S.X.
0.02 2e+0 34 Ta.26126.1.A1_at CD452840 - - 5e-4 At3g28610 ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding C.G. S.X.
0.01 2e+0 34 Ta.14598.1.S1_at CK163954 Peroxisomal ascorbate peroxidase - 2e-13 At4g35000 APX3 (ASCORBATE PEROXIDASE 3) C.G. S.X.
0.02 2e+0 34 Ta.14160.1.S1_at BJ212195 - - 8e+0 At5g64080 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 8e+0 32 Arabidopsis thaliana At5g41450 834146 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:endomembrane system;PMOFVB - - - C.G. S.X.
0.02 2e-1 38 Glycine max Gma.2055.1.S1_s_at AW348801 - - 5e-6 At1g13890 SNAP30 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 30) C.G. S.X.
0.02 4e+0 32 Hordeum vulgare Contig23482_at Contig23482 - - 7e-1 At3g12460 3'-5' exonuclease/ nucleic acid binding C.G. S.X.
0.02 4e+0 34 Oryza sativa Os09g0538600 AK108458.1 - Peroxisome type ascorbate peroxidase 2e-12 At4g35000 APX3 (ASCORBATE PEROXIDASE 3) C.G. S.X.
0.02 3e+0 34 Populus trichocarpa PtpAffx.44880.1.S1_at CK116059 - - 1e+0 At2g45520 unknown protein C.G. S.X.
0.03 6e-1 34 Vitis vinifera 1618621_s_at BQ800042 - - 6e+0 At3g52470 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein C.G. S.X.
0.02 3e+0 32 Zea mays Zm.9696.1.S1_at BM337562 - - 5e+0 At4g08039 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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