CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID TaAffx.7157.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.42 60.9 TaAffx.7157.1.S1_at CA667298 - - 5e-2 At3g21080 ABC transporter-related S.X. H.G.
0.40 58.4 TaAffx.109046.1.S1_at CA680861 - - 4e+0 At2g43660 glycosyl hydrolase family protein 17 S.X. H.G.
0.15 17.1 TaAffx.118765.1.S1_at BJ310345 - - 8e-2 At2g35170 MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein /phosphatidylinositol-4-phosphate 5-kinase-related S.X. H.G.
0.07 8.6 TaAffx.84252.1.S1_at CA641509 - - 4e+0 At5g04600 RNA recognition motif (RRM)-containing protein S.X. H.G.
0.05 6.7 TaAffx.83971.1.S1_at CA647091 - - 1e+0 At3g10350 anion-transporting ATPase family protein S.X. H.G.
0.04 5.8 TaAffx.113556.1.S1_at CA609690 - - 3e-1 Atmg00010 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
19.0 99.7 GSM314260 tissue type: seedling, root - rep1 GSE12508 Transcription patterns during wheat development
18.3 99.7 GSM250895 Tc_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
13.9 99.5 GSM250898 TcLr1_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
12.0 99.4 GSM250900 TcLr34_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
10.1 99.2 GSM314276 tissue type: pistil, before anthesis - rep2 GSE12508 Transcription patterns during wheat development
9.9 99.1 GSM250899 TcLr34_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.2 99.0 GSM250896 Tc_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.0 98.5 GSM298067 Leaf tissue of Paragon at 5 weeks post germination, biological rep 1 GSE11774 Expression data from cold treated wheat cultivars
5.4 97.7 GSM143495 Jupateco_Lr34 (resistant), mock inoculated distal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.8 97.2 GSM143498 Jupateco_Lr34 (susceptible), mock inoculated basal leaf, replication 3 GSE6227 Expression data from rust or mock inoculated, fully expanded flag leaf halves
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 7e-14 77 TaAffx.105136.1.S1_at CA735120 - - 1e-34 Atcg00170 - C.G. S.X.
0.06 7e-14 77 Ta.22674.2.S1_at CA693614 - - 1e-1 At5g19590 unknown protein C.G. S.X.
0.11 7e-14 77 Ta.20140.1.S1_at CA670467 - - 8e+0 At5g58210 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.08 3e-13 75 TaAffx.82669.1.S1_at CA668749 - - 4e+0 At4g37750 ANT (AINTEGUMENTA) C.G. S.X.
0.10 1e-12 73 TaAffx.128541.8.S1_at CA674356 - - 4e+0 At5g59000 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.05 1e-12 73 Ta.430.1.A1_x_at BJ262684 - - 9e-74 At5g42270 VAR1 (VARIEGATED 1) C.G. S.X.
0.05 1e-12 73 Ta.1385.4.S1_x_at BJ306625 - - 1e-75 At5g17920 ATMS1 C.G. S.X.
0.05 1e-12 73 Ta.1385.4.S1_at BJ306625 - - 1e-75 At5g17920 ATMS1 C.G. S.X.
0.08 4e-12 71 TaAffx.109765.2.S1_at CA669372 - - 4e-3 At3g17100 transcription factor C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 5e-2 38 Arabidopsis thaliana At3g21080 821660 ABC transporter-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.04 5e-3 42 Glycine max GmaAffx.89523.1.A1_at CK606544 - - 7e-6 At5g18030 auxin-responsive protein, putative C.G. S.X.
0.03 2e+0 32 Hordeum vulgare HVSMEf0015P21r2_s_at HVSMEf0015P21r2 - - 5e-3 At1g23010 LPR1 (Low Phosphate Root1) C.G. S.X.
0.04 4e-1 36 Oryza sativa Os05g0115100 AK106226.1 - Eukaryotic DNA topoisomerases I, dispensableinsert domain containing protein 4e-2 At1g02965 unknown protein C.G. S.X.
0.04 1e+0 34 Populus trichocarpa PtpAffx.22714.2.S1_at DN490806 - - 1e+1 At5g45020 - C.G. S.X.
0.04 4e+0 30 Vitis vinifera 1619607_s_at CF202338.1 hypothetical protein LOC100242775 - 7e-3 At4g11020 unknown protein C.G. S.X.
0.05 2e-3 42 Zea mays Zm.2984.2.A1_at CF059668 - - 3e+0 At5g39520 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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