Gene omics information

Query gene ID	TaAffx.7064.3.A1_at
Gene name
Organism	Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.77	90.8	TaAffx.7064.3.A1_at	CA699318	-	-	2e+1	At3g29575	AFP3 (ABI FIVE BINDING PROTEIN 3)	S.X.	H.G.	Please select
0.36	51.9	TaAffx.7064.1.S1_at	CA670224	-	-	9e+0	At2g37435	cysteine-type endopeptidase inhibitor	S.X.	H.G.	Please select
0.13	14.6	Ta.19618.1.S1_at	CA654177	-	-	1e+0	At5g02420	unknown protein	S.X.	H.G.	Please select
0.10	11.3	Ta.18024.1.S1_at	BJ239902	-	-	9e-6	At3g03160	unknown protein	S.X.	H.G.	Please select
0.03	4.7	Ta.14782.1.S1_at	CA681982	-	-	3e+0	At5g44500	small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putative	S.X.	H.G.	Please select
0.01	2.4	Ta.7608.2.A1_a_at	CA703665	-	-	5e+0	At1g07745	RAD51D (ARABIDOPSIS HOMOLOG OF RAD51 D)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.9	98.0	GSM314285	tissue type: 22 DAP embryo - rep2	GSE12508	Transcription patterns during wheat development
5.4	97.7	GSM111187	genotype B68 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
5.4	97.7	GSM314284	tissue type: 22 DAP embryo - rep1	GSE12508	Transcription patterns during wheat development
4.7	97.1	GSM111213	genotype DH91 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.7	97.1	GSM138154	genotype H5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.5	96.9	GSM314286	tissue type: 22 DAP embryo - rep3	GSE12508	Transcription patterns during wheat development
4.0	96.3	GSM111185	genotype C22 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.0	96.3	GSM111236	genotype F38b developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.9	96.1	GSM138153	genotype G32 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.9	96.1	GSM111225	genotype A81 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.43	8e-51	200	TaAffx.7064.1.S1_at	CA670224	-	-	9e+0	At2g37435	cysteine-type endopeptidase inhibitor	C.G.	S.X.	Please select
0.14	8e-17	87	TaAffx.7064.2.S1_at	CA669957	-	-	1e+0	At3g07590	small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putative	C.G.	S.X.	Please select
0.04	4e+0	32	TaAffx.57143.1.S1_at	CA635810	-	-	2e-1	At2g27390	proline-rich family protein	C.G.	S.X.	Please select
0.04	4e+0	32	TaAffx.57143.1.S1_x_at	CA635810	-	-	2e-1	At2g27390	proline-rich family protein	C.G.	S.X.	Please select
0.03	4e+0	32	TaAffx.28610.1.S1_at	CA658297	-	-	3e-4	At3g48000	ALDH2B4 (ALDEHYDE DEHYDROGENASE 2B4)	C.G.	S.X.	Please select
0.02	4e+0	32	Ta.9368.1.S1_a_at	CD861507	-	-	1e-1	At2g27390	proline-rich family protein	C.G.	S.X.	Please select
0.03	4e+0	32	Ta.8110.2.S1_a_at	CA603645	-	-	1e-12	At2g25280	-	C.G.	S.X.	Please select
0.02	4e+0	32	Ta.8066.1.S1_a_at	BQ161219	-	-	5e-5	At2g47420	dimethyladenosine transferase, putative	C.G.	S.X.	Please select
0.02	4e+0	32	Ta.8066.1.S1_x_at	BQ161219	-	-	5e-5	At2g47420	dimethyladenosine transferase, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e+1	30	Arabidopsis thaliana	At3g29575	822619	AFP3 (ABI FIVE BINDING PROTEIN 3)	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	6e+0	32	Glycine max	PsAffx.psZS008xF11f_at	PsAffx.psZS008xF11f	-	-	4e+0	At1g02710	glycine-rich protein	C.G.	S.X.	Please select
0.34	1e-66	252	Hordeum vulgare	Contig9485_at	Contig9485	-	-	8e-1	At3g29575	AFP3 (ABI FIVE BINDING PROTEIN 3)	C.G.	S.X.	Please select
0.14	2e-3	44	Oryza sativa	Os07g0602900	9635.m04117	-	Conserved hypothetical protein	5e-1	At1g54830	NF-YC3 (NUCLEAR FACTOR Y, SUBUNIT C3)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	6e+0	32	Populus trichocarpa	PtpAffx.50616.1.A1_at	CV239482	hypothetical protein	-	1e-10	At3g29575	AFP3 (ABI FIVE BINDING PROTEIN 3)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	5e+0	30	Vitis vinifera	1622069_at	CD801772	-	-	2e+0	At1g74340	dolichol phosphate-mannose biosynthesis regulatory protein-related	C.G.	S.X.	Please select
0.06	2e+0	32	Zea mays	Zm.17814.1.S1_at	CD446349	UPF0737 protein 1	-	6e-1	At5g14110	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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