CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID TaAffx.68094.1.S1_at

Gene name

Organism Triticum aestivum

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.93 98.7 TaAffx.68094.1.S1_at CA727033 - - 3e+0 At3g58400 meprin and TRAF homology domain-containing protein / MATH domain-containing protein S.X. H.G.
0.35 49.8 TaAffx.26470.1.S1_at CA688638 - - 4e+0 At4g21610 LOL2 (LSD ONE LIKE 2) S.X. H.G.
0.29 39.2 TaAffx.4744.1.S1_at CA733134 - - 4e+0 At1g04660 glycine-rich protein S.X. H.G.
0.27 35.6 TaAffx.55930.1.S1_at CA659349 - - 6e+0 At5g63240 glycosyl hydrolase family protein 17 S.X. H.G.
0.25 32.1 TaAffx.110697.1.S1_at CA679731 - - 4e+0 At1g47450 unknown protein S.X. H.G.
0.23 29.0 Ta.9542.3.S1_x_at CA640676 - - 4e-3 At5g01810 CIPK15 (CBL-INTERACTING PROTEIN KINASE 15) S.X. H.G.
0.21 25.5 TaAffx.4772.1.S1_at CA732425 - - 2e+1 At5g39240 unknown protein S.X. H.G.
0.21 25.5 TaAffx.23723.1.S1_at CA731348 - - 2e+1 At5g09445 unknown protein S.X. H.G.
0.18 21.0 TaAffx.80426.1.S1_at CA600418 - - 4e-1 At2g12935 unknown protein S.X. H.G.
0.18 21.0 Ta.1238.3.S1_a_at CA728496 - - 3e-1 At1g25472 CPuORF54 (Conserved peptide upstream open reading frame 54) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
20.6 99.7 GSM250896 Tc_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
14.2 99.5 GSM250898 TcLr1_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
12.7 99.4 GSM250899 TcLr34_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
12.0 99.4 GSM250897 TcLr1_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.7 99.1 GSM250900 TcLr34_3dpi_inoculated_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.3 98.8 GSM250908 Tc_7dpi_inoculated_rep2 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.9 97.3 GSM250895 Tc_3dpi_mock_rep3 GSE9915 Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.3 96.7 GSM138151 genotype H10 developing seed at 5 days after anthesis, biological rep3 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.1 96.4 GSM138174 genotype A81 developing seed at 5 days after anthesis, biological rep1 GSE5939 Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.1 96.4 GSM298092 Crown tissue of Solstice at 3 weeks post germination GSE11774 Expression data from cold treated wheat cultivars
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 9e-1 34 TaAffx.83848.1.S1_at CA649629 - - 4e+0 At4g13500 unknown protein C.G. S.X.
0.03 9e-1 34 Ta.1659.3.S1_a_at CA593306 - - 1e+0 At3g55420 unknown protein C.G. S.X.
0.03 3e+0 32 TaAffx.86983.1.S1_at CA597673 - - 1e+0 At1g29520 AWPM-19-like membrane family protein C.G. S.X.
0.03 3e+0 32 TaAffx.30856.1.S1_at CA621562 - - 1e+0 At1g79630 protein phosphatase 2C family protein / PP2C family protein C.G. S.X.
0.03 3e+0 32 TaAffx.110373.1.S1_at CA659624 - - 4e+0 At1g29160 Dof-type zinc finger domain-containing protein C.G. S.X.
0.04 3e+0 32 TaAffx.106359.1.S1_at CA655213 - - 3e-1 At4g16780 ATHB-2 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2) C.G. S.X.
0.03 3e+0 32 Ta.7389.1.S1_a_at BJ272922 - - 3e-1 At1g17300 unknown protein C.G. S.X.
0.03 3e+0 32 Ta.7389.1.S1_x_at BJ272922 - - 3e-1 At1g17300 unknown protein C.G. S.X.
0.03 3e+0 32 Ta.7389.2.A1_x_at CK215961 - - 3e-1 At3g02670 proline-rich family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e+0 32 Arabidopsis thaliana At3g58400 825009 meprin and TRAF homology domain-containing protein / MATH domain-containing protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PO - - - C.G. S.X.
0.04 3e-1 36 Glycine max PsAffx.CL529Contig1_at PsAffx.CL529Contig1 - - 3e-1 At5g28630 glycine-rich protein C.G. S.X.
0.04 2e+0 32 Hordeum vulgare HS07P13u_s_at HS07P13u - - 5e-5 At3g16780 60S ribosomal protein L19 (RPL19B) C.G. S.X.
0.11 2e-30 133 Oryza sativa Os07g0457300 AK073856.1 - - 5e-9 At1g01770 unknown protein C.G. S.X.
0.06 7e-2 38 Populus trichocarpa PtpAffx.8177.1.S1_at CA930481 hypothetical protein - 2e-49 At1g01770 unknown protein C.G. S.X.
0.04 4e+0 30 Vitis vinifera 1616852_at BQ796225 - - 5e-2 At4g23780 unknown protein C.G. S.X.
0.03 9e-2 36 Zea mays Zm.18065.1.A1_at CK985885 - - 2e+0 At4g29160 SNF7.1 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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